RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ADAM28Q9UKQ2 775 aa4.62□□□□□ -1.67
VPS50-214ENST00000477935 EME2A4GXA9 379 aaPredicted RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 HEPACAM2A8MVW5 462 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 VNN2O95498 520 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ZBTB11O95625 1053 aaPredicted RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 PPP1R3DO95685 299 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 SERPINF2P08697 491 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 PCNAP12004 261 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 HLA-EP13747 358 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 SLC2A4P14672 509 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ADSSP30520 456 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 NR1H2P55055 460 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 CLDN2P57739 230 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 KRTAP10-9P60411 292 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 EFNB1P98172 346 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ELAVL2Q12926 359 aaKnown RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 PON2Q15165 354 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ESCO2Q56NI9 601 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ZNF766Q5HY98 468 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 KLHL24Q6TFL4 600 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 PRSS57Q6UWY2 283 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 C18orf65Q6ZTR6 163 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ZNF410Q86VK4 478 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 ZNF354CQ86Y25 554 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 DCP1BQ8IZD4 617 aaKnown RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 LMO3Q8TAP4 145 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 LNX1Q8TBB1 728 aaPredicted RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 RTP4Q96DX8 246 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 MED8Q96G25 268 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 SEC62Q99442 399 aaKnown RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 GTPBP2Q9BX10 602 aaKnown RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 INTS2Q9H0H0 1204 aaKnown RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 CYSLTR2Q9NS75 346 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 NRBP2Q9NSY0 501 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 BEX4Q9NWD9 120 aaPredicted RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 HCFC1R1Q9NWW0 138 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 OR6C3Q9NZP0 311 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 KIAA1456Q9P272 454 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 PIN4Q9Y237 131 aaKnown RBP4.61□□□□□ -1.67
VPS50-214ENST00000477935 PAM16Q9Y3D7 125 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 A3GALT2U3KPV4 340 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 WDR81Q562E7 1941 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 SF3B1O75533 1304 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS50-214ENST00000477935 DOPEY2Q9Y3R5 2298 aa4.61□□□□□ -1.67
VPS50-214ENST00000477935 GOLGA4Q13439 2230 aaKnown RBP4.6□□□□□ -1.67
VPS50-214ENST00000477935 ZFHX3Q15911 3703 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 A0A0U1RQJ8 604 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 ARHGEF37A1IGU5 675 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 PRSS44E7EML9 344 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 TRDMT1O14717 391 aaKnown RBP4.6□□□□□ -1.67
VPS50-214ENST00000477935 MEIS2O14770 477 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 SH3BP5O60239 455 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 RGS11O94810 467 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 CH25HO95992 272 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 CEBPBP17676 345 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 EDN2P20800 178 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 HOXC13P31276 330 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 ELF1P32519 619 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 KIF5BP33176 963 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 MAPK9P45984 424 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 CLCN3P51790 818 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 UCNP55089 124 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 CDH15P55291 814 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 HDAC4P56524 1084 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 VAMP2P63027 116 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 TUBA1BP68363 451 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 NCBP1Q09161 790 aaKnown RBP4.6□□□□□ -1.67
VPS50-214ENST00000477935 PSMD5Q16401 504 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 IZUMO4Q1ZYL8 232 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 SOWAHAQ2M3V2 549 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 KRTAP21-3Q3LHN1 58 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 ITPRIPL2Q3MIP1 535 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 C9orf57Q5W0N0 161 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 SLC22A25Q6T423 547 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 CATSPER4Q7RTX7 472 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 C16orf82Q7Z2V1 217 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 TADA2BQ86TJ2 420 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 TICAM2Q86XR7 235 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 HACE1Q8IYU2 909 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 ELMOD1Q8N336 334 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 MINDY1Q8N5J2 469 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 PARP16Q8N5Y8 322 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 GJC3Q8NFK1 279 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 ZNF461Q8TAF7 563 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 NOC3LQ8WTT2 800 aaKnown RBP4.6□□□□□ -1.67
VPS50-214ENST00000477935 SNAPC3Q92966 411 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 USP13Q92995 863 aaPredicted RBP4.6□□□□□ -1.67
VPS50-214ENST00000477935 OTULINQ96BN8 352 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 NXPE2Q96DL1 559 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 ZC3HAV1LQ96H79 300 aaKnown RBP4.6□□□□□ -1.67
VPS50-214ENST00000477935 MXRA8Q9BRK3 442 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 IL25Q9H293 177 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 LY9Q9HBG7 655 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 HCN3Q9P1Z3 774 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 PILRBQ9UKJ0 227 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 FBN2P35556 2912 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 MGAQ8IWI9 3026 aa4.6□□□□□ -1.67
VPS50-214ENST00000477935 MTCL1Q9Y4B5 1905 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms