RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 ZNF761Q86XN6 746 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 DEFB124Q8NES8 71 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 OR5K2Q8NHB8 316 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 MZB1Q8WU39 189 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 NAT6Q93015 286 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CCDC74AQ96AQ1 378 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 FERD3LQ96RJ6 166 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CDC6Q99741 560 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 TMEM109Q9BVC6 243 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 UNKQ9C0B0 810 aaKnown RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 VPS11Q9H270 941 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 MVB12BQ9H7P6 319 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 TLK1Q9UKI8 766 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 RNF215Q9Y6U7 377 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 COL27A1Q8IZC6 1860 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 UNC13CQ8NB66 2214 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 PRAMEF33A0A0G2JMD5 474 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CPED1A4D0V7 1026 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 ARHGEF33A8MVX0 844 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 BTN3A1O00481 513 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 NUDT21O43809 227 aaKnown RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 HYAL3O43820 417 aaPredicted RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 MATN4O95460 622 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CCDC166P0CW27 439 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 GLB1P16278 677 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 CSRP3P50461 194 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 GPR18Q14330 331 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 EFL1Q7Z2Z2 1120 aaKnown RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 RBM12BQ8IXT5 1001 aaKnown RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 TBC1D21Q8IYX1 336 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 IQCKQ8N0W5 287 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 PHC3Q8NDX5 983 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 OR6C4Q8NGE1 309 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 KCTD4Q8WVF5 259 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 DERL2Q9GZP9 239 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 KIR3DX1Q9H7L2 352 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 SLC40A1Q9NP59 571 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 TDRKHQ9Y2W6 561 aaKnown RBP14.92□□□□□ -0.02
SEC13-215ENST00000477547 ACOT9Q9Y305 439 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 COLEC10Q9Y6Z7 277 aa14.92□□□□□ -0.02
SEC13-215ENST00000477547 EME2A4GXA9 379 aaPredicted RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 LILRA5A6NI73 299 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 TAF4O00268 1085 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 PPM1DO15297 605 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 PSIP1O75475 530 aaKnown RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 RFPL1O75677 317 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 ZIC2O95409 532 aaPredicted RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 MT-ND3P03897 115 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 MPOP05164 745 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 C8GP07360 202 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 LTA4HP09960 611 aaKnown RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 CEACAM1P13688 526 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 CKMT2P17540 419 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 CCNFP41002 786 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 PRKG2Q13237 762 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 PERM1Q5SV97 790 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 TIFABQ6ZNK6 161 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 TMEM26Q6ZUK4 368 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 UBE2R2Q712K3 238 aaPredicted RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 ZNF438Q7Z4V0 828 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 CROCCP2Q86T23 111 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 ADAMTSL2Q86TH1 951 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 CENPLQ8N0S6 344 aaPredicted RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 CYP4X1Q8N118 509 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 SPATA6LQ8N4H0 392 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 IFI44Q8TCB0 444 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 JPH3Q8WXH2 748 aaPredicted RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 SH3KBP1Q96B97 665 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 ZBTB9Q96C00 473 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 PDLIM5Q96HC4 596 aaKnown RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 CABS1Q96KC9 395 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 UBXN10Q96LJ8 280 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 TSNARE1Q96NA8 513 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 SLC38A3Q99624 504 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.91□□□□□ -0.02
SEC13-215ENST00000477547 SLC32A1Q9H598 525 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 LRIT1Q9P2V4 623 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 CIDEBQ9UHD4 219 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 ADAMTS6Q9UKP5 1117 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 IKZF3Q9UKT9 509 aa14.91□□□□□ -0.02
SEC13-215ENST00000477547 ADAMTS20P59510 1910 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 PCM1Q15154 2024 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 KRT87PA6NCN2 255 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 PABPN1LA6NDY0 278 aaKnown RBP14.9□□□□□ -0.02
SEC13-215ENST00000477547 FOXO6A8MYZ6 492 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 GOLGA8RI6L899 631 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 CDC7O00311 574 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 TNFSF14O43557 240 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 ZBTB14O43829 449 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 KDM1AO60341 852 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 C1orf105O95561 183 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 CD1DP15813 335 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 CYP2A7P20853 494 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 CSRP1P21291 193 aaKnown RBP14.9□□□□□ -0.02
SEC13-215ENST00000477547 ACP1P24666 158 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 MAP4P27816 1152 aaKnown RBP14.9□□□□□ -0.02
SEC13-215ENST00000477547 SLC26A3P40879 764 aa14.9□□□□□ -0.02
SEC13-215ENST00000477547 PPM1FP49593 454 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms