RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 VIPP01282 170 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 ENO2P09104 434 aaPredicted RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 RBP1P09455 135 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 MAP4P27816 1152 aaKnown RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 UBE2IP63279 158 aaKnown RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 PHKG1Q16816 387 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 C14orf28Q4W4Y0 310 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 N4BP2L1Q5TBK1 243 aaPredicted RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 C16orf46Q6P387 395 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 TTC23LQ6PF05 361 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 FRA10AC1Q70Z53 315 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 C17orf82Q86X59 251 aaPredicted RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 SLC35F3Q8IY50 421 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 ARL14Q8N4G2 192 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 AVL9Q8NBF6 648 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 FBXO15Q8NCQ5 510 aaPredicted RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 RHEBL1Q8TAI7 183 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 STAG3L4Q8TBR4 150 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 MAGEC3Q8TD91 643 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 MCOLN3Q8TDD5 553 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 DLG3Q92796 817 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 SLC12A9Q9BXP2 914 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 STN1Q9H668 368 aaKnown RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 PARVBQ9HBI1 364 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 POLG2Q9UHN1 485 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 GRID1Q9ULK0 1009 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 RNF112Q9ULX5 631 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 PDE10AQ9Y233 779 aa15.76■□□□□ 0.11
VHL-203ENST00000477538 TDRKHQ9Y2W6 561 aaKnown RBP15.76■□□□□ 0.11
VHL-203ENST00000477538 ZFHX2Q9C0A1 2572 aaPredicted RBP15.75■□□□□ 0.11
VHL-203ENST00000477538 PRAMEF33A0A0G2JMD5 474 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 FLRT2O43155 660 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 SIGLEC6O43699 453 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 TYROBPO43914 113 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 KERAO60938 352 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 GRK6P43250 576 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 FASLGP48023 281 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 HHEXQ03014 270 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 GPS2Q13227 327 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 PRKG2Q13237 762 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 SLC14A1Q13336 389 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 PPP1R3AQ16821 1122 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 CCSMST1Q4G0I0 132 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 HSP90B2PQ58FF3 399 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 DBX2Q6ZNG2 339 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 GPSM1Q86YR5 675 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 EXT2Q93063 718 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 CAMK1GQ96NX5 476 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 ATOH8Q96SQ7 321 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 MRPL57Q9BQC6 102 aaKnown RBP15.75■□□□□ 0.11
VHL-203ENST00000477538 TRIM54Q9BYV2 358 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 MRPL46Q9H2W6 279 aaKnown RBP15.75■□□□□ 0.11
VHL-203ENST00000477538 SLC40A1Q9NP59 571 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 UTP6Q9NYH9 597 aaKnown RBP15.75■□□□□ 0.11
VHL-203ENST00000477538 XPR1Q9UBH6 696 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 BTBD3Q9Y2F9 522 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 OARD1Q9Y530 152 aa15.75■□□□□ 0.11
VHL-203ENST00000477538 KRT87PA6NCN2 255 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 SYCE1LA8MT33 242 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 SUPT3HB4E1H0 165 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 TK2O00142 265 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 PRPF4O43172 522 aaKnown RBP eCLIP15.74■□□□□ 0.11
VHL-203ENST00000477538 SUPT3HO75486 399 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 HIST1H2AGP0C0S8 130 aaPredicted RBP15.74■□□□□ 0.11
VHL-203ENST00000477538 HIST1H2ADP20671 130 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 KCNC1P48547 511 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 RPIAP49247 311 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 BIRC2Q13490 618 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 GPR18Q14330 331 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 CCDC153Q494R4 210 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.74■□□□□ 0.11
VHL-203ENST00000477538 RBM12BQ8IXT5 1001 aaKnown RBP15.74■□□□□ 0.11
VHL-203ENST00000477538 FAM181AQ8N9Y4 354 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 TCP10LQ8TDR4 215 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 ZFPM2Q8WW38 1151 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 RAD51AP1Q96B01 352 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 HIST1H2AHQ96KK5 128 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 APOLD1Q96LR9 279 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 HIST1H2AJQ99878 128 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 H2AFJQ9BTM1 129 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 C12orf65Q9H3J6 166 aaKnown RBP15.74■□□□□ 0.11
VHL-203ENST00000477538 KIR3DX1Q9H7L2 352 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 RDH14Q9HBH5 336 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 KCNK9Q9NPC2 374 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 MED4Q9NPJ6 270 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 CPSF2Q9P2I0 782 aaKnown RBP15.74■□□□□ 0.11
VHL-203ENST00000477538 CIDEBQ9UHD4 219 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 EMCNQ9ULC0 261 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 PLLPQ9Y342 182 aa15.74■□□□□ 0.11
VHL-203ENST00000477538 MDC1Q14676 2089 aaKnown RBP15.74■□□□□ 0.11
VHL-203ENST00000477538 ZNF292O60281 2723 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 C4orf47A7E2U8 309 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 MYO1CO00159 1063 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 KDM1AO60341 852 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 GDF9O60383 454 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 PLIN3O60664 434 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 GUCA1CO95843 209 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 PROCP04070 461 aa15.73■□□□□ 0.11
VHL-203ENST00000477538 S100BP04271 92 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms