RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 ESAMQ96AP7 390 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 LOXL4Q96JB6 756 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 IL17FQ96PD4 163 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 TMEM237Q96Q45 408 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 HGH1Q9BTY7 390 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 GSDMCQ9BYG8 508 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 ZNF395Q9H8N7 513 aaPredicted RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 WASH6PQ9NQA3 447 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 IMP3Q9NV31 184 aaKnown RBP9.04□□□□□ -0.96
PGK1-204ENST00000477335 SPASTQ9UBP0 616 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 SLC6A14Q9UN76 642 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 CUL9Q8IWT3 2517 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 CACNA1EQ15878 2313 aa9.04□□□□□ -0.96
PGK1-204ENST00000477335 ADAMTS9Q9P2N4 1935 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 B4DGG1 531 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SUPT3HB4E1H0 165 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 LMO7DNF2Z398 122 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 MYO1CO00159 1063 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 TRIM38O00635 465 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 ARHGAP33O14559 1287 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 POLR3GO15318 223 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 SLC16A5O15375 505 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SUPT3HO75486 399 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 FGF3P11487 239 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 MYF5P13349 255 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 F3P13726 295 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 CTSEP14091 401 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 ENGP17813 658 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 BGNP21810 368 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 ATP5F1P24539 256 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 BLKP51451 505 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PRKG2Q13237 762 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SP140Q13342 867 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 FASTKQ14296 549 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 SF3A2Q15428 464 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 UNC50Q53HI1 259 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 DMRTA1Q5VZB9 504 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 LAIR1Q6GTX8 287 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 KLC3Q6P597 504 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 UNC5DQ6UXZ4 953 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 C17orf82Q86X59 251 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 LRRC56Q8IYG6 542 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 SFRP1Q8N474 314 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PTGR2Q8N8N7 351 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 CCDC63Q8NA47 563 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 KYQ8NBH2 561 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PDPRQ8NCN5 879 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 FBXO15Q8NCQ5 510 aaPredicted RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 PPFIBP2Q8ND30 876 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 FAM46DQ8NEK8 389 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 OR5K2Q8NHB8 316 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 CEP76Q8TAP6 659 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SLC37A2Q8TED4 501 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SAP25Q8TEE9 199 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SKA1Q96BD8 255 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 RHBDF1Q96CC6 855 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PHF21BQ96EK2 531 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 TSNARE1Q96NA8 513 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 NSUN5Q96P11 429 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 FERD3LQ96RJ6 166 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 KCNK17Q96T54 332 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PAIP2Q9BPZ3 127 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 PITPNM3Q9BZ71 974 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 XKR8Q9H6D3 395 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 GAREM1Q9H706 876 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 CNOT10Q9H9A5 744 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 RDH14Q9HBH5 336 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PARVBQ9HBI1 364 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PARD6AQ9NPB6 346 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 RXFP3Q9NSD7 469 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 NUDT4Q9NZJ9 180 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 NCKIPSDQ9NZQ3 722 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 SIRPGQ9P1W8 387 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PTBP2Q9UKA9 531 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 ASF1AQ9Y294 204 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 PCDHGA5Q9Y5G8 931 aa9.03□□□□□ -0.96
PGK1-204ENST00000477335 ZFC3H1O60293 1989 aaKnown RBP9.03□□□□□ -0.96
PGK1-204ENST00000477335 TDRD6O60522 2096 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 LY6G6EA0A0G2JKS1 128 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 A0A1B0GTL3 188 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 LNP1A1A4G5 178 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 IFRD1O00458 451 aaPredicted RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 DLL1O00548 723 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 CASC3O15234 703 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 ITM2AO43736 263 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 SLC16A8O95907 504 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 CATP04040 527 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 RPS17P08708 135 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 MYL2P10916 166 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 ERGP11308 486 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 TSPAN8P19075 237 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 EPORP19235 508 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 IMPA1P29218 277 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 EEF1DP29692 281 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 PEBP1P30086 187 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 GDF5P43026 501 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 RPIAP49247 311 aa9.02□□□□□ -0.97
PGK1-204ENST00000477335 KPNA2P52292 529 aaKnown RBP9.02□□□□□ -0.97
PGK1-204ENST00000477335 PRKAA2P54646 552 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms