RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 VPS9D1Q9Y2B5 631 aa23.29■■□□□ 1.32
CPNE1-223ENST00000475146 ITPR1Q14643 2758 aa23.29■■□□□ 1.32
CPNE1-223ENST00000475146 PIPSLA2A3N6 862 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 SPAG6O75602 509 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 LONRF1Q17RB8 773 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 TAF1BQ53T94 588 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-223ENST00000475146 UNC5DQ6UXZ4 953 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 CENPUQ71F23 418 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 DCUN1D3Q8IWE4 304 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 ESX1Q8N693 406 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 FAM136AQ96C01 138 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 TRIM51Q9BSJ1 452 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 GPN2Q9H9Y4 310 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-223ENST00000475146 INTS10Q9NVR2 710 aaKnown RBP23.28■■□□□ 1.32
CPNE1-223ENST00000475146 BTRCQ9Y297 605 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 CACNA1GO43497 2377 aa23.28■■□□□ 1.32
CPNE1-223ENST00000475146 EIF4E1BA6NMX2 242 aaKnown RBP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 MAP3K7O43318 606 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 TIAF1O95411 115 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 F7P08709 466 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 CHRM5P08912 532 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 ST6GAL1P15907 406 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 PGAM1P18669 254 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 CHRM3P20309 590 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 TUBB4BP68371 445 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 DHX9Q08211 1270 aaKnown RBP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 TUBB2AQ13885 445 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 MAP7Q14244 749 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 GPR19Q15760 415 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 PLEKHS1Q5SXH7 462 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 C6orf15Q6UXA7 325 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 DENND6AQ8IWF6 608 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 UNC5BQ8IZJ1 945 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 GALNT6Q8NCL4 622 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 CALML6Q8TD86 181 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 TUBB2BQ9BVA1 445 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 KLHL25Q9H0H3 589 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 OR6C2Q9NZP2 312 aa23.27■■□□□ 1.32
CPNE1-223ENST00000475146 TSR3Q9UJK0 312 aaKnown RBP23.27■■□□□ 1.32
CPNE1-223ENST00000475146 LOC101059948A0A1B0GTJ6 334 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 E5RI56 91 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 ERVH48-1M5A8F1 160 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 ATXN7O15265 892 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-223ENST00000475146 TTI1O43156 1089 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 BANF1O75531 89 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 TPBGLP0DKB5 382 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 PKMP14618 531 aaKnown RBP23.26■■□□□ 1.31
CPNE1-223ENST00000475146 PVRP15151 417 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 ADARP55265 1226 aaKnown RBP23.26■■□□□ 1.31
CPNE1-223ENST00000475146 ABHD18Q0P651 414 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 CTBP1Q13363 440 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 BBS9Q3SYG4 887 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 ZNF789Q5FWF6 425 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 SPESP1Q6UW49 350 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 TRIM73Q86UV7 250 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 BPHLQ86WA6 291 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-223ENST00000475146 PITPNM3Q9BZ71 974 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 CCDC68Q9H2F9 335 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 FANCEQ9HB96 536 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 FBXO6Q9NRD1 293 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-223ENST00000475146 KCND1Q9NSA2 647 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 CIDEBQ9UHD4 219 aa23.26■■□□□ 1.31
CPNE1-223ENST00000475146 S1PR4O95977 384 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 UGT2B7P16662 529 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 IVDP26440 423 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 PKLRP30613 574 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 CASQ1P31415 396 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 SLC1A2P43004 574 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 MORF4L2Q15014 288 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 PWWP2BQ6NUJ5 590 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 TTC23LQ6PF05 361 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 FOPNLQ96NB1 174 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 KRT12Q99456 494 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 FAM167BQ9BTA0 163 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 TRIM31Q9BZY9 425 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 SPHK1Q9NYA1 384 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 RUVBL2Q9Y230 463 aaKnown RBP23.25■■□□□ 1.31
CPNE1-223ENST00000475146 FAM169AQ9Y6X4 670 aa23.25■■□□□ 1.31
CPNE1-223ENST00000475146 ISM1B1AKI9 464 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 STAT5AP42229 794 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 BDKRB1P46663 353 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 RAB28P51157 221 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 CRYMQ14894 314 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 KYNUQ16719 465 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 MSS51Q4VC12 460 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 HSP90AA5PQ58FG0 334 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 CNSTQ6PJW8 725 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 KCNMB4Q86W47 210 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 TMEM126BQ8IUX1 230 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 LMNTD2Q8IXW0 634 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 ZBTB2Q8N680 514 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 ZNF501Q96CX3 271 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-223ENST00000475146 IL17FQ96PD4 163 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 FCRL4Q96PJ5 515 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 TRAPPC9Q96Q05 1148 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 OR2A14Q96R47 310 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 EBNA1BP2Q99848 306 aaKnown RBP23.24■■□□□ 1.31
CPNE1-223ENST00000475146 EFHD1Q9BUP0 239 aa23.24■■□□□ 1.31
CPNE1-223ENST00000475146 SLC39A10Q9ULF5 831 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms