RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CYTH2Q99418 400 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 GPR22Q99680 433 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 RBBP8Q99708 897 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CDC6Q99741 560 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CPNE1Q99829 537 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 MENTQ9BUN1 341 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 TWSG1Q9GZX9 223 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 CAB39LQ9H9S4 337 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 SARS2Q9NP81 518 aaKnown RBP6.81□□□□□ -1.32
LIMD1-204ENST00000474665 OGFRQ9NZT2 677 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 KLHL42Q9P2K6 505 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 FTSJ1Q9UET6 329 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 DOLKQ9UPQ8 538 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 NFS1Q9Y697 457 aa6.81□□□□□ -1.32
LIMD1-204ENST00000474665 FAM95CA0A1B0GW59 222 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 OR5K4A6NMS3 321 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 FOXO6A8MYZ6 492 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 NTN3O00634 580 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PHGDHO43175 533 aaKnown RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ALDOAP04075 364 aaKnown RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ITGA2BP08514 1039 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 SLC35G4P0C7Q5 338 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ALPPL2P10696 532 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 JUPP14923 745 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 GLB1P16278 677 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 VCLP18206 1134 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CHRM3P20309 590 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 MCM3P25205 808 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CD1CP29017 333 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ATP5DP30049 168 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CSF2RBP32927 897 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PDX1P52945 283 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PPP1CAP62136 330 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CCL7P80098 99 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 HHEXQ03014 270 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ABRQ12979 859 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 NAB1Q13506 487 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 BMPR2Q13873 1038 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 GPR18Q14330 331 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ZXDCQ2QGD7 858 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 INAVAQ3KP66 663 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CCSMST1Q4G0I0 132 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PLEKHS1Q5SXH7 462 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 NKAIN2Q5VXU1 208 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 KIAA1614Q5VZ46 1190 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 ATG14Q6ZNE5 492 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CEP128Q6ZU80 1094 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 TMEM26Q6ZUK4 368 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 OTOAQ7RTW8 1153 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PIWIL4Q7Z3Z4 852 aaKnown RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 SPRED1Q7Z699 444 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CMC1Q7Z7K0 106 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CPNE9Q8IYJ1 553 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 MREGQ8N565 214 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 Q8N9G6 341 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 LMNTD1Q8N9Z9 388 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 IFI44Q8TCB0 444 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 MAPK15Q8TD08 544 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 EEF1AKMT1Q8WVE0 214 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 TFGQ92734 400 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 INPP5DQ92835 1189 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 GLMNQ92990 594 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CAVIN3Q969G5 261 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 TMEM159Q96B96 161 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 C12orf66Q96MD2 445 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PHF12Q96QT6 1004 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PANX3Q96QZ0 392 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 PAFAH2Q99487 392 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 TBC1D10AQ9BXI6 508 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 IMP3Q9NV31 184 aaKnown RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 EURLQ9NYK6 297 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 LRIT1Q9P2V4 623 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CIDEBQ9UHD4 219 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 TSR3Q9UJK0 312 aaKnown RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 SLC39A10Q9ULF5 831 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 CORO1CQ9ULV4 474 aaPredicted RBP6.8□□□□□ -1.32
LIMD1-204ENST00000474665 COMMD10Q9Y6G5 202 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 FER1L5A0AVI2 2057 aa6.8□□□□□ -1.32
LIMD1-204ENST00000474665 A0A087WUV0 522 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 IGHV1OR21-1A0A087WYE8 117 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 A0A1W2PNU3 283 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 BLACEA4D250 179 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ARHGEF33A8MVX0 844 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 E5RI56 91 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 GFYI3L273 518 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PFDN6O15212 129 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 OPA1O60313 960 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 BRINP1O60477 761 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 VPS26AO75436 327 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PSIP1O75475 530 aaKnown RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 C1orf105O95561 183 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 APOA4P06727 396 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 GP1BAP07359 652 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 SLC35E2BP0CK96 405 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PNLIPP16233 465 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ZNF37AP17032 561 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 SAT1P21673 171 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PHBP35232 272 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms