RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 VPS33AQ96AX1 596 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 MTERF3Q96E29 417 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 ARSGQ96EG1 525 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 ABHD8Q96I13 439 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 FNDC11Q9BVV2 318 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 DDX25Q9UHL0 483 aaKnown RBP3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 OSGIN1Q9UJX0 560 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 KCNK7Q9Y2U2 307 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 CCL27Q9Y4X3 112 aa3.31□□□□□ -1.88
TMEM50B-208ENST00000474272 EDDM13A0A1B0GTR0 161 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 SYNGR3O43761 229 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 SYNCRIPO60506 623 aaKnown RBP3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 EIF5BO60841 1220 aaKnown RBP3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 DIAPH2O60879 1101 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 CTSVO60911 334 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 IGHV4-39P01824 125 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 APOA4P06727 396 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 LINGO3P0C6S8 592 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 OR2T7P0C7T2 308 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 DANCRP0C864 163 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 RNF224P0DH78 156 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 PFKFB1P16118 471 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 NR1D1P20393 614 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 CBLP22681 906 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 THOP1P52888 689 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 MFAP5Q13361 173 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 CAMK2DQ13557 499 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 ZNF876PQ49A33 203 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 KRT80Q6KB66 452 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 ZNF852Q6ZMS4 543 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 CENPVQ7Z7K6 275 aaPredicted RBP3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 IQCHQ86VS3 1027 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 TICAM2Q86XR7 235 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 METTL27Q8N6F8 245 aaPredicted RBP3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 L3MBTL4Q8NA19 623 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 MAPK1IP1LQ8NDC0 245 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 MOSPD2Q8NHP6 518 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 EXD1Q8NHP7 514 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 ZNF524Q96C55 264 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 RMDN1Q96DB5 314 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 SPDL1Q96EA4 605 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 CFAP57Q96MR6 1250 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 C17orf77Q96MU5 243 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 LRRC1Q9BTT6 524 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 NOL11Q9H8H0 719 aaKnown RBP3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 FKRPQ9H9S5 495 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 IL17BQ9UHF5 180 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 TUBE1Q9UJT0 475 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 GRIP1Q9Y3R0 1128 aa3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.3□□□□□ -1.88
TMEM50B-208ENST00000474272 TOP2AP11388 1531 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 CEP162Q5TB80 1403 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 ELOVL7A1L3X0 281 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 TSPY2A6NKD2 308 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 TRIM77I1YAP6 450 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 CELF2O95319 508 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 H1F0P07305 194 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 PATE4P0C8F1 98 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 TSPY3P0CV98 308 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 TSPY8P0CW00 308 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 CKMT2P17540 419 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 CYP11B2P19099 503 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 EEF1DP29692 281 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 DVL1P1P54792 670 aaPredicted RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 TPD52P55327 224 aaPredicted RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 TSPY1Q01534 308 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 GAGE5Q13069 117 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 GAGE6Q13070 117 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 COG2Q14746 738 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 DUOXA1Q1HG43 343 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 VWC2Q2TAL6 325 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 CST9LP1Q5W188 147 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 CPSF7Q8N684 471 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 PI4KAP1Q8N8J0 262 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 RDM1Q8NG50 284 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 OR5M8Q8NGP6 311 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 MRPS27Q92552 414 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 LMF2Q9BU23 707 aaKnown RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 FAM129AQ9BZQ8 928 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 WNT5BQ9H1J7 359 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 OPA3Q9H6K4 179 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 ERVMER34-1Q9H9K5 563 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 ACKR4Q9NPB9 350 aa3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 ZHX1Q9UKY1 873 aaPredicted RBP3.29□□□□□ -1.88
TMEM50B-208ENST00000474272 SOGA1O94964 1423 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 SOS1Q07889 1333 aaPredicted RBP3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 IGLV5-45A0A087WSX0 123 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 A0A1W2PPI3 338 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 HYKKA2RU49 373 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 PTGESO14684 152 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 IPO8O15397 1037 aaKnown RBP3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 TSPAN1O60635 241 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 FYNP06241 537 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 MPZP25189 248 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 RAB28P51157 221 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 ZNF41P51814 821 aaPredicted RBP3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 HSPB3Q12988 150 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 KIR2DS3Q14952 304 aa3.28□□□□□ -1.88
TMEM50B-208ENST00000474272 LPAL2Q16609 132 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms