RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PLXNB3Q9ULL4 1909 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 DYTNA2CJ06 578 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 LOC730098B7Z3J9 87 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 CBFA2T3O75081 653 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 XYLBO75191 536 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SERPINB7O75635 380 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 GLUD1P00367 558 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 PFKLP17858 780 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 TTKP33981 857 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 OR1D2P34982 312 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 CD47Q08722 323 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 PON2Q15165 354 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 MAPKAPK3Q16644 382 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 PTRHD1Q6GMV3 140 aaKnown RBP10.71□□□□□ -0.69
C9orf3-214ENST00000473778 RGMBQ6NW40 437 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SPESP1Q6UW49 350 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 GCNT7Q6ZNI0 430 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SLC16A12Q6ZSM3 486 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 CHST9Q7L1S5 443 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 BTLAQ7Z6A9 289 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 ZSWIM9Q86XI8 627 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 PLPP6Q8IY26 295 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 CARNMT1Q8N4J0 409 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 LEMD2Q8NC56 503 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 PJA1Q8NG27 643 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 NETO1Q8TDF5 533 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 GIPC3Q8TF64 312 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 VOPP1Q96AW1 172 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SLC47A1Q96FL8 570 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 TUBA1CQ9BQE3 449 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 FEM1AQ9BSK4 669 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 YTHDF1Q9BYJ9 559 aaKnown RBP10.71□□□□□ -0.69
C9orf3-214ENST00000473778 CLMPQ9H6B4 373 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 KAT8Q9H7Z6 458 aaKnown RBP10.71□□□□□ -0.69
C9orf3-214ENST00000473778 ACTR8Q9H981 624 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 TRPV5Q9NQA5 729 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SERHLQ9NQF3 203 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 VPS51Q9UID3 782 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 TMEFF2Q9UIK5 374 aaPredicted RBP10.71□□□□□ -0.69
C9orf3-214ENST00000473778 DLGAP4Q9Y2H0 992 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 OARD1Q9Y530 152 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 PCDHB14Q9Y5E9 798 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 TNPO3Q9Y5L0 923 aaKnown RBP10.71□□□□□ -0.69
C9orf3-214ENST00000473778 OR51B4Q9Y5P0 310 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 COMMD10Q9Y6G5 202 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SLC30A1Q9Y6M5 507 aa10.71□□□□□ -0.69
C9orf3-214ENST00000473778 SCN5AQ14524 2016 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CXCR6O00574 342 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 RAD51BO15315 384 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CLDN7O95471 211 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 GSNP06396 782 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CCNA2P20248 432 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 TACR1P25103 407 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 PTPN6P29350 595 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CDKN2CP42773 168 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 GZMMP51124 257 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 FCGRTP55899 365 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 RHOAP61586 193 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 NFATC2Q13469 925 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 SPIDRQ14159 915 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CDKN3Q16667 212 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ZNF829Q3KNS6 432 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 RUNDC3AQ59EK9 446 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 THOC7Q6I9Y2 204 aaKnown RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 PRR23BQ6ZRT6 265 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ANKRD46Q86W74 232 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 SLC15A4Q8N697 577 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 PCSK9Q8NBP7 692 aaKnown RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ALG14Q96F25 216 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 PLEKHA8Q96JA3 519 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 EGFL8Q99944 293 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 INPP5KQ9BT40 448 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 TTPALQ9BTX7 342 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CD244Q9BZW8 370 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CLPBQ9H078 707 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ASB8Q9H765 288 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 RNF186Q9NXI6 227 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 DNAJB9Q9UBS3 223 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ZNF490Q9ULM2 529 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ELOVL7A1L3X0 281 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 MAN1A2O60476 641 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 MITFO75030 526 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 PGLSO95336 258 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ZBTB11O95625 1053 aaPredicted RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 MAP4P27816 1152 aaKnown RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 HTR1BP28222 390 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 CCR3P51677 355 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 ISL1P61371 349 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 BFSP2Q13515 415 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 SPCS2Q15005 226 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 USP39Q53GS9 565 aaKnown RBP10.7□□□□□ -0.7
C9orf3-214ENST00000473778 LDLRAP1Q5SW96 308 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 C6orf141Q5SZD1 244 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 GPRC6AQ5T6X5 926 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 BROXQ5VW32 411 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 LAIR1Q6GTX8 287 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 TRIM46Q7Z4K8 759 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 TSPAN33Q86UF1 283 aa10.7□□□□□ -0.7
C9orf3-214ENST00000473778 APCDD1Q8J025 514 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms