RNA–Protein interactions for RNA: ENST00000473608.1

RAB5A-207, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 868 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-207ENST00000473608 RETREG1Q9H6L5 497 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 LMAN1LQ9HAT1 526 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 MIOSQ9NXC5 875 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 ZNF224Q9NZL3 707 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 CDH7Q9ULB5 785 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 KCNS2Q9ULS6 477 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 SNX7Q9UNH6 387 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 OR2W1Q9Y3N9 320 aa4□□□□□ -1.77
RAB5A-207ENST00000473608 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4□□□□□ -1.77
RAB5A-207ENST00000473608 TEX13DA0A0J9YY54 714 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ZCWPW2A0A1B0GU75 182 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ANKRD66B4E2M5 251 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ZNF587BE7ETH6 402 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 EIF3DO15371 548 aaKnown RBP eCLIP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 AP5Z1O43299 807 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ZBTB11O95625 1053 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 PPP1R3DO95685 299 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 HLA-DOBP13765 273 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ITGA2P17301 1181 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 POLR2CP19387 275 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 PSMA3P25788 255 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 TIA1P31483 386 aaKnown RBP eCLIP3.99□□□□□ -1.777e-13■■■□□ 16.5
RAB5A-207ENST00000473608 LHX1P48742 406 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 AMPHP49418 695 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 MMP15P51511 669 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ALDH3A2P51648 485 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 MAT1AQ00266 395 aaKnown RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 MYBPHQ13203 477 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 UGCGQ16739 394 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 TCTE1Q5JU00 501 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 SFMBT2Q5VUG0 894 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 NADSYN1Q6IA69 706 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 RHBDF2Q6PJF5 856 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 PRSS57Q6UWY2 283 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 NHLRC1Q6VVB1 395 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 GBP6Q6ZN66 633 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 TMEM182Q6ZP80 229 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 C15orf39Q6ZRI6 1047 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ASB18Q6ZVZ8 466 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ARMC9Q7Z3E5 817 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 SPATA21Q7Z572 469 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 SATL1Q86VE3 508 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 HOOK3Q86VS8 718 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 TIGD4Q8IY51 512 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 RNF113BQ8IZP6 322 aaKnown RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 NR4A3Q92570 626 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 NSMAFQ92636 917 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 DAZLQ92904 295 aaKnown RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 ST6GALNAC6Q969X2 333 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 MTBPQ96DY7 904 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 MTERF3Q96E29 417 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 MEIS3Q99687 375 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 CD93Q9NPY3 652 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 TCP11L1Q9NUJ3 509 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 CWC25Q9NXE8 425 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 SMARCAL1Q9NZC9 954 aa3.99□□□□□ -1.77
RAB5A-207ENST00000473608 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 CPSF3Q9UKF6 684 aaKnown RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 SPIN1Q9Y657 262 aaPredicted RBP3.99□□□□□ -1.77
RAB5A-207ENST00000473608 NOTCH3Q9UM47 2321 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 A0A1W2PPK0 400 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 HYKKA2RU49 373 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 OOEPA6NGQ2 149 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 BUD23O43709 281 aaKnown RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 BMP10O95393 424 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 PMS2P2O95744 297 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 WDPCPO95876 746 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 FAM106CPP0CH98 169 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 ACP2P11117 423 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 FGF3P11487 239 aaPredicted RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 FCGR1AP12314 374 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 EEF2P13639 858 aaKnown RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 GM2AP17900 193 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 SP100P23497 879 aaPredicted RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 ACAT1P24752 427 aaKnown RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 KCNJ1P48048 391 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 RELQ04864 619 aaPredicted RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 COASYQ13057 564 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 ITGA7Q13683 1181 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 ODF2Q5BJF6 829 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 GLRA4Q5JXX5 417 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 TRNP1Q6NT89 227 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 MFSD12Q6NUT3 480 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 KLC3Q6P597 504 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 SLC27A1Q6PCB7 646 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 PLXDC2Q6UX71 529 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 LINGO4Q6UY18 593 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 NUP54Q7Z3B4 507 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 UNC45BQ8IWX7 931 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 TUSC5Q8IXB3 177 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 DBF4BQ8NFT6 615 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 HEXDCQ8WVB3 486 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 SYN2Q92777 582 aaPredicted RBP3.98□□□□□ -1.77
RAB5A-207ENST00000473608 DNASE1L2Q92874 299 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 SNX21Q969T3 373 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 EXOC4Q96A65 974 aa3.98□□□□□ -1.77
RAB5A-207ENST00000473608 TMEM19Q96HH6 336 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms