RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	ZNF718	Q3SXZ3	478 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	SYT14P1	Q58G82	188 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	KRT39	Q6A163	491 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	GDPD4	Q6W3E5	623 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	ZBTB49	Q6ZSB9	765 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	ANKRD23	Q86SG2	305 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	TMPRSS11B	Q86T26	416 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	ZNF554	Q86TJ5	538 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	ARHGAP24	Q8N264	748 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	KLHDC9	Q8NEP7	349 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	OR13J1	Q8NGT2	312 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	CCDC107	Q8WV48	283 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	SSMEM1	Q8WWF3	244 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	IRGQ	Q8WZA9	623 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	HSD17B8	Q92506	261 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	MOB3A	Q96BX8	217 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	SLC47A1	Q96FL8	570 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	TFB2M	Q9H5Q4	396 aa	Known RBP	3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	PELI2	Q9HAT8	420 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	PFDN4	Q9NQP4	134 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	FAM118A	Q9NWS6	357 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	SLC7A7	Q9UM01	511 aa		3.56	□□□□□ -1.84
PTCD3-209	ENST00000472044	PCDH11Y	Q9BZA8	1340 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044		A0A087WV48	116 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	TSPY2	A6NKD2	308 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	GAPDHS	O14556	408 aa	Predicted RBP	3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	INHBA	P08476	426 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	TSPY3	P0CV98	308 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	TSPY8	P0CW00	308 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	SAG	P10523	405 aa	Predicted RBP	3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	CYP11B2	P19099	503 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	EPHA2	P29317	976 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	LHX1	P48742	406 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	CX3CL1	P78423	397 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	TSPY1	Q01534	308 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	C6orf136	Q5SQH8	315 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	ARMC3	Q5W041	872 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	C19orf48	Q6RUI8	117 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	ANO5	Q75V66	913 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	THNSL1	Q8IYQ7	743 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	CIART	Q8N365	385 aa	Predicted RBP	3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	ZNF611	Q8N823	705 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	NPEPL1	Q8NDH3	523 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	EXT2	Q93063	718 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	SPSB1	Q96BD6	273 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	MYADM	Q96S97	322 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	CPNE1	Q99829	537 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	RTP3	Q9BQQ7	232 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	MMP28	Q9H239	520 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	SH3GLB2	Q9NR46	395 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	COQ3	Q9NZJ6	369 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	TAAR2	Q9P1P5	351 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	ANAPC5	Q9UJX4	755 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	FAF1	Q9UNN5	650 aa	Predicted RBP	3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	JRKL	Q9Y4A0	524 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	TRIM17	Q9Y577	477 aa		3.55	□□□□□ -1.84
PTCD3-209	ENST00000472044	OR6C76	A6NM76	312 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ANXA2P2	A6NMY6	339 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	PRSS44	E7EML9	344 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	P2RY10	O00398	339 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	XPNPEP2	O43895	674 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	FGF17	O60258	216 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	DIAPH2	O60879	1101 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	SIX3	O95343	332 aa	Predicted RBP	3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	PIGN	O95427	931 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	CSN3	P07498	182 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	IGHV4-38-2	P0DP08	117 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	HSPA8	P11142	646 aa	Known RBP	3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	FDPS	P14324	419 aa	Known RBP	3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	LIF	P15018	202 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	GLUL	P15104	373 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	PSMA3	P25788	255 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	PTPN3	P26045	913 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	CDC25C	P30307	473 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	HSPA4	P34932	840 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	GP5	P40197	560 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ALDH3A2	P51648	485 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	MAPK12	P53778	367 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	LGALS3BP	Q08380	585 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ITGA7	Q13683	1181 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	TECRL	Q5HYJ1	363 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	FAM76B	Q5HYJ3	339 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ELFN2	Q5R3F8	820 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	RUSC1-AS1	Q66K80	236 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	C11orf63	Q6NUN7	778 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	SLC27A1	Q6PCB7	646 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	CORO6	Q6QEF8	472 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	SUSD1	Q6UWL2	747 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ADCK2	Q7Z695	626 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	METTL23	Q86XA0	190 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	IQUB	Q8NA54	791 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	GRHL3	Q8TE85	626 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	SYN2	Q92777	582 aa	Predicted RBP	3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ALG14	Q96F25	216 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	SIPA1	Q96FS4	1042 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	RMDN2	Q96LZ7	410 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	ZNF558	Q96NG5	402 aa		3.54	□□□□□ -1.84
PTCD3-209	ENST00000472044	SPAG5	Q96R06	1193 aa		3.54	□□□□□ -1.84

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