RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 JMJD7P0C870 316 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ACP5P13686 325 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GSTT1P30711 240 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GTF2H2Q13888 395 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF460Q14592 562 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ARSIQ5FYB1 569 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GTF2H2CQ6P1K8 395 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 VSIG10LQ86VR7 867 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PIGXQ8TBF5 258 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 POC1BQ8TC44 478 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CDH19Q9H159 772 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CPQQ9Y646 472 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RNF17Q9BXT8 1623 aaKnown RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 C5orf60A6NFR6 353 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ARPC2O15144 300 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PAPSS2O95340 614 aaPredicted RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CPNE6O95741 557 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FOLH1Q04609 750 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TUSC3Q13454 348 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 IDNKQ5T6J7 187 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TLR10Q9BXR5 811 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 B8ZZF3 427 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 BCKDKO14874 412 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RGS6P49758 472 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CHIT1Q13231 466 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SCGB2B2Q4G0G5 96 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NIPA1Q7RTP0 329 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GPAT4Q86UL3 456 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CAND1Q86VP6 1230 aaKnown RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SPERTQ8NA61 448 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR5T2Q8NGG2 359 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CAPNS2Q96L46 248 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SAR1AQ9NR31 198 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLC30A4O14863 429 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MPPED1O15442 326 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ITGAVP06756 1048 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TYRP1P17643 537 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PTPN2P17706 415 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ILF2Q12905 390 aaKnown RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 E2F2Q14209 437 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LRRC32Q14392 662 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HEPACAMQ14CZ8 416 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 C1orf186Q6ZWK4 172 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 METTL27Q8N6F8 245 aaPredicted RBP13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HMCESQ96FZ2 354 aa13.03□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 B4GALT2O60909 372 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RPP40O75818 363 aaKnown RBP13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MLLT6P55198 1093 aaPredicted RBP13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CDH12P55289 794 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LIPEQ05469 1076 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 EEF1DP3Q658K8 133 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PLA2G15Q8NCC3 412 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MGME1Q9BQP7 344 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF670Q9BS34 389 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 VNN3Q9NY84 501 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 WFS1O76024 890 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PTDSS1P48651 473 aaKnown RBP13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NCBP2P52298 156 aaKnown RBP eCLIP13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR12D2P58182 307 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KLF1Q13351 362 aaPredicted RBP13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLC29A4Q7RTT9 530 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NXPE1Q8N323 547 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FAM47BQ8NA70 645 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CRTAC1Q9NQ79 661 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF175Q9Y473 711 aa13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HEMK1Q9Y5R4 338 aaPredicted RBP13.02□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ELOA3DA6NLF2 546 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SSX5O60225 188 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TGFB1P01137 390 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TUBG1P23258 451 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ELOA3BQ3SY89 546 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PPM1JQ5JR12 505 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 AMZ2Q86W34 360 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MREGQ8N565 214 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 BOLLQ8N9W6 283 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ELOA3Q8NG57 546 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MED28Q9H204 178 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CHRAC1Q9NRG0 131 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FBXO9Q9UK97 447 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UNC13BO14795 1591 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 LSM1O15116 133 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 MYCLP1P12525 358 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 SMARCB1Q12824 385 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 UGCGQ16739 394 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 FIGNQ5HY92 759 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 OGFOD2Q6N063 350 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 ZNF548Q8NEK5 533 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 PPTC7Q8NI37 304 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 CCDC59Q9P031 241 aaKnown RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 DOCK7Q96N67 2140 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 INO80Q9ULG1 1556 aaPredicted RBP13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 TCRBV9S1A1TA0A576 114 aa13.02□□□□□ -0.33
NPHP3-ACAD11-201ENST00000471702 H0YGN5 161 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms