RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 BTN3A3O00478 584 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 KIF1CO43896 1103 aaKnown RBP19.17■□□□□ 0.66
HDAC7-220ENST00000471235 MATN4O95460 622 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 POLR2CP19387 275 aaPredicted RBP19.17■□□□□ 0.66
HDAC7-220ENST00000471235 ITIH1P19827 911 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 MCM3P25205 808 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 PKLRP30613 574 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 SHMT2P34897 504 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 GRB7Q14451 532 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 UBAP2Q5T6F2 1119 aaKnown RBP19.17■□□□□ 0.66
HDAC7-220ENST00000471235 HECTD2Q5U5R9 776 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 FAM45BPQ6NSW5 357 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 IGF2-ASQ6U949 168 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 CEP128Q6ZU80 1094 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 NEK10Q6ZWH5 1172 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 AGBL5Q8NDL9 886 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 FAM45AQ8TCE6 357 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 MCMBPQ9BTE3 642 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 TAS2R13Q9NYV9 303 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 NINJ2Q9NZG7 142 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 AKAP7Q9P0M2 348 aaPredicted RBP19.17■□□□□ 0.66
HDAC7-220ENST00000471235 CIDEBQ9UHD4 219 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 APC2O95996 2303 aa19.17■□□□□ 0.66
HDAC7-220ENST00000471235 SPAG6O75602 509 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 TNFSF15O95150 251 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 C1orf105O95561 183 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 JMJD7P0C870 316 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 MPC1LP0DKB6 136 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 CCL4P13236 92 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 ENO3P13929 434 aaPredicted RBP19.16■□□□□ 0.66
HDAC7-220ENST00000471235 FDXRP22570 491 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 STX2P32856 288 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 CSTF2P33240 577 aaKnown RBP eCLIP19.16■□□□□ 0.66
HDAC7-220ENST00000471235 KPNA2P52292 529 aaKnown RBP19.16■□□□□ 0.66
HDAC7-220ENST00000471235 KYNUQ16719 465 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 CCSMST1Q4G0I0 132 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 UGT3A1Q6NUS8 523 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 ARMC6Q6NXE6 501 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 CYS1Q717R9 158 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 RELL1Q8IUW5 271 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 ADGRF3Q8IZF5 1079 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 FBF1Q8TES7 1133 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 CDKL2Q92772 493 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 FOPNLQ96NB1 174 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 CD180Q99467 661 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 OLFM1Q99784 485 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 MENTQ9BUN1 341 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 RHOJQ9H4E5 214 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 ZNF768Q9H5H4 540 aaKnown RBP19.16■□□□□ 0.66
HDAC7-220ENST00000471235 POMT2Q9UKY4 750 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 ACACAQ13085 2346 aa19.16■□□□□ 0.66
HDAC7-220ENST00000471235 HEATR5BQ9P2D3 2071 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 WDFY3Q8IZQ1 3526 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 FAM95CA0A1B0GW59 222 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 GSAPA4D1B5 854 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 KRT87PA6NCN2 255 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 TLCD2A6NGC4 264 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 ARHGEF33A8MVX0 844 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 EIF3FO00303 357 aaPredicted RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 MATN2O00339 956 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 TOX3O15405 576 aaPredicted RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 KDM1AO60341 852 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 RASSF9O75901 435 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 ITGA2BP08514 1039 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 CBSLP0DN79 551 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 CD9P21926 228 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 CBSP35520 551 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 MLLT3P42568 568 aaPredicted RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 PGGT1BP53609 377 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 PRKAA1Q13131 559 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 EFTUD2Q15029 972 aaKnown RBP eCLIP19.15■□□□□ 0.661e-6■■■■□ 25.3
HDAC7-220ENST00000471235 TBC1D25Q3MII6 688 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 KBTBD12Q3ZCT8 623 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 TEX35Q5T0J7 233 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 CACHD1Q5VU97 1274 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 PIWIL4Q7Z3Z4 852 aaKnown RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 IFT20Q8IY31 132 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 LSMEM2Q8N112 164 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 BMPERQ8N8U9 685 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 VPS39Q96JC1 886 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 ELMO2Q96JJ3 720 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 SLC46A1Q96NT5 459 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 IL17FQ96PD4 163 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 MAP3K3Q99759 626 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 TWSG1Q9GZX9 223 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 CDC42EP4Q9H3Q1 356 aaKnown RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 OCIAD1Q9NX40 245 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 SIDT1Q9NXL6 827 aaKnown RBP19.15■□□□□ 0.66
HDAC7-220ENST00000471235 SEMA5BQ9P283 1151 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 NFU1Q9UMS0 254 aa19.15■□□□□ 0.66
HDAC7-220ENST00000471235 ASPMQ8IZT6 3477 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 EFCAB7A8K855 629 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 CDRT15L2A8MXV6 281 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 PSIP1O75475 530 aaKnown RBP19.14■□□□□ 0.65
HDAC7-220ENST00000471235 CHRM5P08912 532 aaPredicted RBP19.14■□□□□ 0.65
HDAC7-220ENST00000471235 FGF3P11487 239 aaPredicted RBP19.14■□□□□ 0.65
HDAC7-220ENST00000471235 RBMS1P29558 406 aaKnown RBP19.14■□□□□ 0.65
HDAC7-220ENST00000471235 CCNFP41002 786 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 SEPHS1P49903 392 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms