RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 UGT2B7P16662 529 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 PTPN3P26045 913 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 DYNLT1P63172 113 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 TMPRSS15P98073 1019 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 ZIC1Q15915 447 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 RBBP7Q16576 425 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 STX1AQ16623 288 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 ODF2Q5BJF6 829 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 RPUSD3Q6P087 351 aaKnown RBP18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 RPTNQ6XPR3 784 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 RFX6Q8HWS3 928 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 IPMKQ8NFU5 416 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 DLG3Q92796 817 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 TEKT5Q96M29 485 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 HSD3B7Q9H2F3 369 aa18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 SOX17Q9H6I2 414 aaPredicted RBP18.26■□□□□ 0.51
NCKIPSD-209ENST00000470006 H3BMH7 237 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 SRP72O76094 671 aaKnown RBP18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 UNC5CO95185 931 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 UQCRHP07919 91 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 PIM1P11309 404 aaPredicted RBP18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 ZFXP17010 805 aaPredicted RBP18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 NFKB1P19838 968 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 SSTR2P30874 369 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 MFAP5Q13361 173 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 SLC1A5Q15758 541 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 KDELC1Q6UW63 502 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 KIRREL2Q6UWL6 708 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 TTLL10Q6ZVT0 673 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 NR4A3Q92570 626 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 LMF1Q96S06 567 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 COG4Q9H9E3 785 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 PLCL2Q9UPR0 1127 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 HS3ST3B1Q9Y662 390 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 ARL5AQ9Y689 179 aa18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 BZW2Q9Y6E2 419 aaKnown RBP18.25■□□□□ 0.51
NCKIPSD-209ENST00000470006 DYTNA2CJ06 578 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 C2orf81A6NN90 581 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 CFAP99D6REC4 459 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 KLHL18O94889 574 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 EPOP01588 193 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 PRLHRP49683 370 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 TDGF1P3P51864 188 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 SLC9A4Q6AI14 798 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 OVCH1Q7RTY7 1134 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 TFGQ92734 400 aaPredicted RBP18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 MRGPRX2Q96LB1 330 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 OLFM3Q96PB7 478 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 OR2A14Q96R47 310 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 FSD1LQ9BXM9 530 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 OR52A5Q9H2C5 316 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 MRM3Q9HC36 420 aaKnown RBP18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 SLC22A11Q9NSA0 550 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 PLA2G3Q9NZ20 509 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 KLHL8Q9P2G9 620 aaPredicted RBP18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 FKBPLQ9UIM3 349 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 ICKQ9UPZ9 632 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 NAV3Q8IVL0 2385 aa18.24■□□□□ 0.51
NCKIPSD-209ENST00000470006 A0A087X0T9 212 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 A0A0J9YY10 115 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 SGTAO43765 313 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 FAM228BP0C875 321 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 ESRRAP11474 423 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 ATP1B2P14415 290 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 PDHA2P29803 388 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 CD68P34810 354 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 GABRA4P48169 554 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 CD151P48509 253 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 CASP6P55212 293 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 RBPJQ06330 500 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 ZNF324BQ6AW86 544 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 ALKBH5Q6P6C2 394 aaKnown RBP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 UNC5AQ6ZN44 842 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 CDH24Q86UP0 819 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 ZNF295-AS1Q8N0V1 137 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 OR4K2Q8NGD2 314 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 CCDC110Q8TBZ0 833 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 FKBP10Q96AY3 582 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 TAAR6Q96RI8 345 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 FAM96AQ9H5X1 160 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 WDR54Q9H977 334 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 VPS37BQ9H9H4 285 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 SEC14L3Q9UDX4 400 aa18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 TDRKHQ9Y2W6 561 aaKnown RBP18.23■□□□□ 0.51
NCKIPSD-209ENST00000470006 C17orf113A0A1B0GUU1 675 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 A0A1B0GX78 115 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 ISM1B1AKI9 464 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 PRICKLE3O43900 615 aaPredicted RBP18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 ALBP02768 609 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 SHMT2P34897 504 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 PBX1P40424 430 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 ARSFP54793 590 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 SRSF11Q05519 484 aaKnown RBP18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 BOP1Q14137 746 aaKnown RBP18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 NKG7Q16617 165 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 SLC5A12Q1EHB4 618 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 XKRXQ6PP77 449 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 SPNS3Q6ZMD2 512 aa18.22■□□□□ 0.51
NCKIPSD-209ENST00000470006 PID1Q7Z2X4 250 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms