RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 KRT4P19013 534 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 ACP1P24666 158 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 RPL10P27635 214 aaKnown RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 HNMTP50135 292 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 DUSP3P51452 185 aaPredicted RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 NAA20P61599 178 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 NFKB2Q00653 900 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 PCDH1Q08174 1060 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 ILKQ13418 452 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 ZNF460Q14592 562 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 CYP2A13Q16696 494 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 CCDC153Q494R4 210 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 TECRLQ5HYJ1 363 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 KLC3Q6P597 504 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 TMEM26Q6ZUK4 368 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 RAPH1Q70E73 1250 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 PIWIL4Q7Z3Z4 852 aaKnown RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 SLC35F3Q8IY50 421 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 LRRC56Q8IYG6 542 aaPredicted RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 ARL14Q8N4G2 192 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 PDPRQ8NCN5 879 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 SPDYE1Q8NFV5 336 aaPredicted RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 RDH11Q8TC12 318 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 MAPK15Q8TD08 544 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 MCOLN3Q8TDD5 553 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 NAT6Q93015 286 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 PTERQ96BW5 349 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 NXNL1Q96CM4 212 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 APOPT1Q96IL0 206 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 ATP6V1G3Q96LB4 118 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 CCDC138Q96M89 665 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 C12orf66Q96MD2 445 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 RAB11FIP5Q9BXF6 653 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 C1QTNF3Q9BXJ4 246 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 TRIT1Q9H3H1 467 aaKnown RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 OSGEPL1Q9H4B0 414 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 STN1Q9H668 368 aaKnown RBP10.97□□□□□ -0.65
MSH5-214ENST00000468602 FSCN3Q9NQT6 498 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 EVA1BQ9NVM1 165 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 EPHA6Q9UF33 1036 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 PDE10AQ9Y233 779 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 PLLPQ9Y342 182 aa10.97□□□□□ -0.65
MSH5-214ENST00000468602 LAMA1P25391 3075 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 ASXL3Q9C0F0 2248 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 SYCE1LA8MT33 242 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 ARHGEF33A8MVX0 844 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 HMGB1P1B2RPK0 211 aaPredicted RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 TM9SF1O15321 606 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 SIGLEC6O43699 453 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 SDC3O75056 442 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 DKK1O94907 266 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 SYF2O95926 243 aaKnown RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 SBK3P0C264 359 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 TPBGLP0DKB5 382 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CDK4P11802 303 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CYP2A7P20853 494 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CSRP1P21291 193 aaKnown RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 PBLDP30039 288 aaPredicted RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 ETV4P43268 484 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 ID4P47928 161 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 GPLD1P80108 840 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 IRF9Q00978 393 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 HHEXQ03014 270 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CSHL1Q14406 222 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CCDC6Q16204 474 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 DEFB133Q30KQ1 61 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 NAPRTQ6XQN6 538 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CARFQ8N187 725 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 PLD6Q8N2A8 252 aaKnown RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 TCAIMQ8N3R3 496 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 OR9A1PQ8NGU1 263 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 NETO1Q8TDF5 533 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 UBTD2Q8WUN7 234 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 KCTD4Q8WVF5 259 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 ATL1Q8WXF7 558 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 APOLD1Q96LR9 279 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CAMK1GQ96NX5 476 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 SMC6Q96SB8 1091 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 CDC6Q99741 560 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 GTPBP2Q9BX10 602 aaKnown RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 TRIM54Q9BYV2 358 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 MRPL46Q9H2W6 279 aaKnown RBP10.96□□□□□ -0.65
MSH5-214ENST00000468602 CAAP1Q9H8G2 361 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 MED4Q9NPJ6 270 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 RXFP3Q9NSD7 469 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 OR6C2Q9NZP2 312 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 SEMA5BQ9P283 1151 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 IKZF3Q9UKT9 509 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 DOLKQ9UPQ8 538 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 ASF1AQ9Y294 204 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 PCDHGA1Q9Y5H4 931 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 KLK4Q9Y5K2 254 aa10.96□□□□□ -0.65
MSH5-214ENST00000468602 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.66
MSH5-214ENST00000468602 ANKRD11Q6UB99 2663 aaPredicted RBP10.95□□□□□ -0.66
MSH5-214ENST00000468602 OR52A4PA6NMU1 304 aa10.95□□□□□ -0.66
MSH5-214ENST00000468602 ZNF839A8K0R7 811 aa10.95□□□□□ -0.66
MSH5-214ENST00000468602 CDC7O00311 574 aa10.95□□□□□ -0.66
MSH5-214ENST00000468602 MATN2O00339 956 aa10.95□□□□□ -0.66
MSH5-214ENST00000468602 PPM1DO15297 605 aa10.95□□□□□ -0.66
MSH5-214ENST00000468602 ZW10O43264 779 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms