RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 OASLQ15646 514 aaKnown RBP23.67■■□□□ 1.38
PTCH1-210ENST00000468211 DEFB110Q30KQ9 67 aa23.67■■□□□ 1.38
PTCH1-210ENST00000468211 NADK2Q4G0N4 442 aa23.67■■□□□ 1.38
PTCH1-210ENST00000468211 LINC00523Q86TU6 105 aa23.67■■□□□ 1.38
PTCH1-210ENST00000468211 HDAC10Q969S8 669 aa23.67■■□□□ 1.38
PTCH1-210ENST00000468211 IMPACTQ9P2X3 320 aa23.67■■□□□ 1.38
PTCH1-210ENST00000468211 PLAGL1Q9UM63 463 aa23.67■■□□□ 1.38
PTCH1-210ENST00000468211 TDRKHQ9Y2W6 561 aaKnown RBP23.67■■□□□ 1.38
PTCH1-210ENST00000468211 PCDHGA9Q9Y5G4 932 aaKnown RBP23.67■■□□□ 1.38
PTCH1-210ENST00000468211 PRRC2CQ9Y520 2896 aaKnown RBP23.66■■□□□ 1.38
PTCH1-210ENST00000468211 USP9YO00507 2555 aaPredicted RBP23.66■■□□□ 1.38
PTCH1-210ENST00000468211 LIASO43766 372 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 GOT2P00505 430 aaKnown RBP23.66■■□□□ 1.38
PTCH1-210ENST00000468211 FTH1P02794 183 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 CHRM5P08912 532 aaPredicted RBP23.66■■□□□ 1.38
PTCH1-210ENST00000468211 ETS1P14921 441 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 PGDP52209 483 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 CDH17Q12864 832 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 ZBTB2Q8N680 514 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 C19orf47Q8N9M1 422 aaKnown RBP23.66■■□□□ 1.38
PTCH1-210ENST00000468211 DNAAF3Q8N9W5 541 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 SPRTNQ9H040 489 aaPredicted RBP23.66■■□□□ 1.38
PTCH1-210ENST00000468211 ANKRD12Q6UB98 2062 aa23.66■■□□□ 1.38
PTCH1-210ENST00000468211 RP1L1Q8IWN7 2480 aaPredicted RBP23.65■■□□□ 1.38
PTCH1-210ENST00000468211 E7EQ34 232 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 CEACAM4O75871 244 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 TMEM63AO94886 807 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 SUN1O94901 812 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 PEBP1P30086 187 aaKnown RBP23.65■■□□□ 1.38
PTCH1-210ENST00000468211 SHMT2P34897 504 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 CSE1LP55060 971 aaKnown RBP23.65■■□□□ 1.38
PTCH1-210ENST00000468211 SEMA3AQ14563 771 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 NCF4Q15080 339 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 TSTD2Q5T7W7 516 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 PAPD7Q5XG87 772 aaKnown RBP23.65■■□□□ 1.38
PTCH1-210ENST00000468211 ZNF534Q76KX8 674 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 TBC1D21Q8IYX1 336 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 GLIS1Q8NBF1 620 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 OR5K2Q8NHB8 316 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 C1orf54Q8WWF1 131 aa23.65■■□□□ 1.38
PTCH1-210ENST00000468211 QSOX1O00391 747 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 MAP3K7O43318 606 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 CBSLP0DN79 551 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 CBSP35520 551 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 VRK3Q8IV63 474 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 LMNTD1Q8N9Z9 388 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 SPC24Q8NBT2 197 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 LKAAEAR1Q8TD35 194 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 SLC7A5P2Q9GIP4 190 aa23.64■■□□□ 1.37
PTCH1-210ENST00000468211 HEATR9A2RTY3 570 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 TTLL8A6PVC2 850 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 ERI2A8K979 691 aaKnown RBP23.63■■□□□ 1.37
PTCH1-210ENST00000468211 IFNB1P01574 187 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 OR56A5P0C7T3 313 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 STIP1P31948 543 aaKnown RBP23.63■■□□□ 1.37
PTCH1-210ENST00000468211 UQCRFS1P47985 274 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 ACVR1Q04771 509 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 ATP1A4Q13733 1029 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 SYTL3Q4VX76 610 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 C1orf189Q5VU69 101 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 PPP1R21Q6ZMI0 780 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 TMEM151BQ8IW70 566 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 FAM20CQ8IXL6 584 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 FDCSPQ8NFU4 85 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 TCTN2Q96GX1 697 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 RANBP9Q96S59 729 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 NUDT9Q9BW91 350 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 POLG2Q9UHN1 485 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 CDYLQ9Y232 598 aa23.63■■□□□ 1.37
PTCH1-210ENST00000468211 A6NL46 340 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 ZNF185O15231 689 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 KLF7O75840 302 aaPredicted RBP23.62■■□□□ 1.37
PTCH1-210ENST00000468211 OR2B3O76000 313 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 ATXN8OSP0DMR3 200 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 CCR7P32248 378 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 FDFT1P37268 417 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 SNX1Q13596 522 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 AFTPHQ6ULP2 937 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 LDB1Q86U70 411 aaPredicted RBP23.62■■□□□ 1.37
PTCH1-210ENST00000468211 HOOK3Q86VS8 718 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 ATCAYQ86WG3 371 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 SLC13A5Q86YT5 568 aaPredicted RBP23.62■■□□□ 1.37
PTCH1-210ENST00000468211 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.62■■□□□ 1.37
PTCH1-210ENST00000468211 CASS4Q9NQ75 786 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 OR6C2Q9NZP2 312 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 CIDEBQ9UHD4 219 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 RIMKLBQ9ULI2 386 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 ZNF148Q9UQR1 794 aa23.62■■□□□ 1.37
PTCH1-210ENST00000468211 A0A0J9YY10 115 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 IQCF5A8MTL0 148 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 SORBS2O94875 1100 aaKnown RBP23.61■■□□□ 1.37
PTCH1-210ENST00000468211 ADRA1DP25100 572 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 FOXL2P58012 376 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 SEL1L2Q5TEA6 688 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 LYPLAL1Q5VWZ2 237 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 GPR135Q8IZ08 494 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 TXLNBQ8N3L3 684 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 FAM26EQ8N5C1 309 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 OR6P1Q8NGX9 317 aa23.61■■□□□ 1.37
PTCH1-210ENST00000468211 OR4L1Q8NH43 312 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms