RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 TMEM126BQ8IUX1 230 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 IFT20Q8IY31 132 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 RASGEF1AQ8N9B8 481 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 EIF1ADQ8N9N8 165 aaKnown RBP13.18□□□□□ -0.3
RPP40-204ENST00000468105 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
RPP40-204ENST00000468105 SNF8Q96H20 258 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 AGAP3Q96P47 875 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 FCRL5Q96RD9 977 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
RPP40-204ENST00000468105 RHOXF2Q9BQY4 288 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 NLNQ9BYT8 704 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 SLC29A3Q9BZD2 475 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 GLOD4Q9HC38 313 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 BPIFA1Q9NP55 256 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 FAM114A2Q9NRY5 505 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 WHRNQ9P202 907 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 RPL26L1Q9UNX3 145 aaKnown RBP13.18□□□□□ -0.3
RPP40-204ENST00000468105 CCDC168Q8NDH2 2452 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
RPP40-204ENST00000468105 OR5K3A6NET4 321 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 PSMD3O43242 534 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 HCRTR1O43613 425 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 SEC31AO94979 1220 aaKnown RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 METTL18O95568 372 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 RAB40ALP0C0E4 278 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 MCM3P25205 808 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 RPL21P46778 160 aaKnown RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 TERF1P54274 439 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 RIPPLY3P57055 190 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 DCDC1P59894 354 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 MRPS25P82663 173 aaKnown RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 GUCY2DQ02846 1103 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 TMEM115Q12893 351 aaPredicted RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 CUL1Q13616 776 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 NFE2L1Q14494 772 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 TRIP13Q15645 432 aaPredicted RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 SP5Q6BEB4 398 aaPredicted RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 MICALCLQ6ZW33 695 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 PRUNE1Q86TP1 453 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 IQCKQ8N0W5 287 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 TADA1Q96BN2 335 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 LRFN5Q96NI6 719 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 ZSCAN5AQ9BUG6 496 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 EIF2B3Q9NR50 452 aaKnown RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 RAB6BQ9NRW1 208 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 HRASLS2Q9NWW9 162 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 NFKBIL1Q9UBC1 381 aaPredicted RBP13.17□□□□□ -0.3
RPP40-204ENST00000468105 RSPH14Q9UHP6 348 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 B3GNT3Q9Y2A9 372 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 ZNF711Q9Y462 761 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 PCDHGA10Q9Y5H3 936 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 SVILO95425 2214 aa13.17□□□□□ -0.3
RPP40-204ENST00000468105 DOCK10Q96BY6 2186 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 TLCD2A6NGC4 264 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 SLC9B1P1A6NJY1 282 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 ERI2A8K979 691 aaKnown RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 GPR89AB7ZAQ6 455 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 GAPDHSO14556 408 aaPredicted RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 LRRTM2O43300 516 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A9O60656 530 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 ZG16O60844 167 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 POP7O75817 140 aaKnown RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 ANXA9O76027 345 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 GPR89BP0CG08 455 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A6P19224 532 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 NFKB1P19838 968 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 TPSB2P20231 275 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A1P22309 533 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A4P22310 534 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 PSMB4P28070 264 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 VPS41P49754 854 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 CDK16Q00536 496 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 CAV1Q03135 178 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 BPHLQ86WA6 291 aaPredicted RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 RBM12BQ8IXT5 1001 aaKnown RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 PPIL6Q8IXY8 311 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 LILRA3Q8N6C8 439 aaPredicted RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 BEND7Q8N7W2 519 aaPredicted RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.16□□□□□ -0.3
RPP40-204ENST00000468105 IMP4Q96G21 291 aaKnown RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 DPH5Q9H2P9 285 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A7Q9HAW7 530 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A10Q9HAW8 530 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 UGT1A8Q9HAW9 530 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 ETNK1Q9HBU6 452 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 GRHL1Q9NZI5 618 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 BTRCQ9Y297 605 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 AAR2Q9Y312 384 aaKnown RBP13.16□□□□□ -0.3
RPP40-204ENST00000468105 SNX24Q9Y343 169 aa13.16□□□□□ -0.3
RPP40-204ENST00000468105 OR6C74A6NCV1 312 aa13.15□□□□□ -0.3
RPP40-204ENST00000468105 VEGFDO43915 354 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms