RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SLC24A5Q71RS6 500 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 ISCA2Q86U28 154 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 SDCCAG3Q96C92 435 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 LRCH3Q96II8 777 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 C3orf30Q96M34 536 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 TTYH2Q9BSA4 534 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 FEM1AQ9BSK4 669 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 MIR1-1HGQ9H1L0 117 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 ARNT2Q9HBZ2 717 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 EML4Q9HC35 981 aaKnown RBP17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 MRM3Q9HC36 420 aaKnown RBP17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 RGS18Q9NS28 235 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 TMEM248Q9NWD8 314 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 RNF186Q9NXI6 227 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 PCDHB5Q9Y5E4 795 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 TDRD15B5MCY1 1934 aaKnown RBP17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 ANGPT2O15123 496 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 GOT2P00505 430 aaKnown RBP17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 ACVR2AP27037 513 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 ST13P50502 369 aaKnown RBP17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 FPGSQ05932 587 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 CD47Q08722 323 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 NADSYN1Q6IA69 706 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 STK32CQ86UX6 486 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 SYTL1Q8IYJ3 562 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 GDF15Q99988 308 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 ACOXLQ9NUZ1 547 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 NUP50Q9UKX7 468 aa17.71■□□□□ 0.43
SNAPC3-205ENST00000467062 FOXM1Q08050 763 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 CTU2Q2VPK5 515 aaKnown RBP17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 C5orf22Q49AR2 442 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 FAM205BPQ63HN1 556 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 FAM122CQ6P4D5 195 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 TMEM173Q86WV6 379 aaPredicted RBP17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 PTRH1Q86Y79 214 aaKnown RBP17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 FUNDC1Q8IVP5 155 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 GALNT6Q8NCL4 622 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 BRSK1Q8TDC3 778 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 NSUN5Q96P11 429 aaKnown RBP17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 SEPHS2Q99611 448 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 SPON2Q9BUD6 331 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 FBXO44Q9H4M3 255 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 OPTCQ9UBM4 332 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 NR5A2O00482 541 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 AGXTP21549 392 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC6A2P23975 617 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 CYHR1Q6ZMK1 362 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 TAS1R1Q7RTX1 841 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 NOXA1Q86UR1 476 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 TTC16Q8NEE8 873 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 OR7D4Q8NG98 312 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 C8orf48Q96LL4 319 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 NARFLQ9H6Q4 476 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 ZMAT5Q9UDW3 170 aaKnown RBP17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 FAM50BQ9Y247 325 aa17.7■□□□□ 0.42
SNAPC3-205ENST00000467062 A0A0J9YYE9 177 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 A0A1B0GTL3 188 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 MROH6A6NGR9 719 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 WASH4PA8MWX3 477 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 UBXN8O00124 270 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 PRKD3O94806 890 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 ARHGEF15O94989 841 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 MT-ND1P03886 318 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 GSTM1P09488 218 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 FOXA1P55317 472 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 BNC1Q01954 994 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 PRKCDQ05655 676 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 SYT6Q5T7P8 510 aaPredicted RBP17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 BPIFB1Q8TDL5 484 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 RNF145Q96MT1 663 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 KCNA7Q96RP8 456 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 KAT8Q9H7Z6 458 aaKnown RBP17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 ITM2CQ9NQX7 267 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 FBXL12Q9NXK8 326 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 A3GALT2U3KPV4 340 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 NLRC5Q86WI3 1866 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 A0A0G2JMP0 313 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 OR5K3A6NET4 321 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 SNX4O95219 450 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 MED26O95402 600 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 TRAPPC2P0DI81 140 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 TRAPPC2BP0DI82 140 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC2A3P11169 496 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 HTR7P34969 479 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC9A3P48764 834 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 CLCN5P51795 746 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 ACLYP53396 1101 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 DNAJB13P59910 316 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 TIAL1Q01085 375 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 VN1R5Q7Z5H4 357 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 CCDC117Q8IWD4 279 aaPredicted RBP17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 TMBIM1Q969X1 311 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 GSTO2Q9H4Y5 243 aa17.69■□□□□ 0.42
SNAPC3-205ENST00000467062 ZFC3H1O60293 1989 aaKnown RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 UBA6A0AVT1 1052 aaPredicted RBP17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 H3BMM5 538 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 SLC10A3P09131 477 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 CYP2A7P20853 494 aa17.68■□□□□ 0.42
SNAPC3-205ENST00000467062 GPX3P22352 226 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms