RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 CCNKO75909 580 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SMIM10L2AP0DMW4 78 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SMIM10L2BP0DMW5 78 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 NKX2-5P52952 324 aaPredicted RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 CAMK2BQ13554 666 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 PCBP2Q15366 365 aaKnown RBP eCLIP19.34■□□□□ 0.691e-9■■■□□ 15.4
SDF4-205ENST00000465727 FAM174BQ3ZCQ3 159 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 TPRG1LQ5T0D9 272 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.34■□□□□ 0.69
SDF4-205ENST00000465727 PIK3R6Q5UE93 754 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 AGAP6Q5VW22 663 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 RSBN1Q5VWQ0 802 aaPredicted RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 ZDHHC21Q8IVQ6 265 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 CCDC103Q8IW40 242 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 PLPP6Q8IY26 295 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SCAMP5Q8TAC9 235 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 AGAP4Q96P64 663 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 CDK15Q96Q40 435 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SNX18Q96RF0 628 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 SEMA3CQ99985 751 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 C1orf109Q9NX04 203 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 PNMA8BQ9ULN7 279 aaPredicted RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 SAMD4AQ9UPU9 718 aaKnown RBP19.34■□□□□ 0.69
SDF4-205ENST00000465727 ASB1Q9Y576 335 aa19.34■□□□□ 0.69
SDF4-205ENST00000465727 TRBV5-3A0A0A0MS03 114 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 MOXD2PA6NHM9 499 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 TBKBP1A7MCY6 615 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 MED26O95402 600 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 APOA1P02647 267 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 PGRP06401 933 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 CARTPTQ16568 116 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 TWF2Q6IBS0 349 aaKnown RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 RNF165Q6ZSG1 346 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 VASH1Q7L8A9 365 aaPredicted RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 TAS2R42Q7RTR8 314 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 ZNF683Q8IZ20 524 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 DCBLD1Q8N8Z6 715 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 Q8N9G6 341 aaPredicted RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 TTC29Q8NA56 475 aaPredicted RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 TP53INP1Q96A56 240 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 ITCHQ96J02 903 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 EMILIN2Q9BXX0 1053 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 C6orf62Q9GZU0 229 aaPredicted RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 ZBTB20Q9HC78 741 aaPredicted RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 MKLN1Q9UL63 735 aa19.33■□□□□ 0.69
SDF4-205ENST00000465727 MRPL42Q9Y6G3 142 aaKnown RBP19.33■□□□□ 0.69
SDF4-205ENST00000465727 PTPRDP23468 1912 aa19.33■□□□□ 0.68
SDF4-205ENST00000465727 PNMA8CA0A1B0GUJ8 204 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 SEC22BO75396 215 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ERN1O75460 977 aaKnown RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 OTCP00480 354 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ARL1P40616 181 aaPredicted RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 DAPP51397 102 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 CLCNKBP51801 687 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ZNF140P52738 457 aaPredicted RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 FPGSQ05932 587 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 PTPRNQ16849 979 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 DUSP28Q4G0W2 176 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 KIAA1614Q5VZ46 1190 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 CCBE1Q6UXH8 406 aaPredicted RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 GCNT7Q6ZNI0 430 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 HOMEZQ8IX15 550 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 METTL4Q8N3J2 472 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 KBTBD8Q8NFY9 601 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 OR6J1Q8NGC5 347 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 NETO1Q8TDF5 533 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 DNAJB3Q8WWF6 145 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ESAMQ96AP7 390 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 FAM120BQ96EK7 910 aaKnown RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 CEP295NLQ96MC4 621 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 RTP3Q9BQQ7 232 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 DPY30Q9C005 99 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 CCDC177Q9NQR7 707 aaPredicted RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 IL37Q9NZH6 218 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ZNF221Q9UK13 617 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 RGS14O43566 566 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 SERPINF2P08697 491 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ODC1P11926 461 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 PKMP14618 531 aaKnown RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 SLC2A4P14672 509 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 KRT20P35900 424 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ARPC4P59998 168 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 RPL38P63173 70 aaKnown RBP19.32■□□□□ 0.68
SDF4-205ENST00000465727 OR2T5Q6IEZ7 315 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 ZNF544Q6NX49 715 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 PARP16Q8N5Y8 322 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 OR4F6Q8NGB9 312 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 OR2T29Q8NH02 315 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 LINGO1Q96FE5 620 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 PITX2Q99697 317 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 CLMPQ9H6B4 373 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.32■□□□□ 0.683e-6■■■■□ 23.1
SDF4-205ENST00000465727 ASIC5Q9NY37 505 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 VNN3Q9NY84 501 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 CACNG4Q9UBN1 327 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 RAPGEFL1Q9UHV5 662 aa19.32■□□□□ 0.68
SDF4-205ENST00000465727 RNF6Q9Y252 685 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms