RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 KYNUQ16719 465 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 HECTD2Q5U5R9 776 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 FAM45BPQ6NSW5 357 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 FAM92BQ6ZTR7 304 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 NEK10Q6ZWH5 1172 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 ZC3HC1Q86WB0 502 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 DCUN1D3Q8IWE4 304 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 AGBL5Q8NDL9 886 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 FAM45AQ8TCE6 357 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 FBF1Q8TES7 1133 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 PRR11Q96HE9 360 aaPredicted RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 SLC46A1Q96NT5 459 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 NRTNQ99748 197 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 ICKQ9UPZ9 632 aa14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 RUVBL2Q9Y230 463 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 TPRP12270 2363 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-205ENST00000464493 PMS2P1A4D2B8 440 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 EIF3FO00303 357 aaPredicted RBP14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 MATN2O00339 956 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 BTN3A3O00478 584 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 KIF1CO43896 1103 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 DXOO77932 396 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 TNFSF15O95150 251 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 C1QAP02745 245 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CAPNS1P04632 268 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 ANKRD34CP0C6C1 535 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 ENO3P13929 434 aaPredicted RBP14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 MCM3P25205 808 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 STX2P32856 288 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 ILF2Q12905 390 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 KBTBD12Q3ZCT8 623 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CACHD1Q5VU97 1274 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 PAQR3Q6TCH7 311 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 IGF2-ASQ6U949 168 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CYHR1Q6ZMK1 362 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 PRSS42Q7Z5A4 293 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 SPNS2Q8IVW8 549 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CTAGE3PQ8IX95 158 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CPNE9Q8IYJ1 553 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 ADGRF3Q8IZF5 1079 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 MAGEC3Q8TD91 643 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 RAD51AP1Q96B01 352 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 ELMO2Q96JJ3 720 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CNTNAP3BQ96NU0 1288 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CD180Q99467 661 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CPNE1Q99829 537 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 CNTNAP3Q9BZ76 1288 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 RHOJQ9H4E5 214 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 OR6C2Q9NZP2 312 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 TXNDC16Q9P2K2 825 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 DKK4Q9UBT3 224 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 PISDQ9UG56 409 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 PLAGL1Q9UM63 463 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 NFU1Q9UMS0 254 aa14.08□□□□□ -0.16
SQSTM1-205ENST00000464493 GSAPA4D1B5 854 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 TMEM8BA6NDV4 472 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 C2orf74A8MZ97 194 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 BTN3A1O00481 513 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 PSIP1O75475 530 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 ITGA2BP08514 1039 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 MPC1LP0DKB6 136 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 CCL4P13236 92 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 ITIH1P19827 911 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 FDXRP22570 491 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 PHBP35232 272 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 MLLT3P42568 568 aaPredicted RBP14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 BDKRB1P46663 353 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 RGS4P49798 205 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 SEPHS1P49903 392 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 RAB28P51157 221 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 GRB7Q14451 532 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 TEX35Q5T0J7 233 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 LRRC8EQ6NSJ5 796 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 EEF1AKMT1Q8WVE0 214 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 UBXN4Q92575 508 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 MAP3K3Q99759 626 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 OLFM1Q99784 485 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 MCMBPQ9BTE3 642 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 MENTQ9BUN1 341 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 ZNF768Q9H5H4 540 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 OCIAD1Q9NX40 245 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 NINJ2Q9NZG7 142 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 SEMA5BQ9P283 1151 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 CIDEBQ9UHD4 219 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 SLC39A10Q9ULF5 831 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 IGF2RP11717 2491 aa14.07□□□□□ -0.16
SQSTM1-205ENST00000464493 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 FAM95CA0A1B0GW59 222 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 PIPSLA2A3N6 862 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 TLCD2A6NGC4 264 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 EFCAB7A8K855 629 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 CATP04040 527 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 CHRM5P08912 532 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 FGF3P11487 239 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 SAT1P21673 171 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 PRDX3P30048 256 aaKnown RBP14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 GP5P40197 560 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 ETV5P41161 510 aa14.06□□□□□ -0.16
SQSTM1-205ENST00000464493 KPNA2P52292 529 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms