RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 CFAP206Q8IYR0 622 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 TRIML1Q8N9V2 468 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 OR13J1Q8NGT2 312 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 LMO3Q8TAP4 145 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 RNF128Q8TEB7 428 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 SSMEM1Q8WWF3 244 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 ATL1Q8WXF7 558 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 MR1Q95460 341 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 ATP6V1E2Q96A05 226 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 RMDN2Q96LZ7 410 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 NOTCH4Q99466 2003 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 TUBA1CQ9BQE3 449 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 GPATCH1Q9BRR8 931 aaKnown RBP4.42□□□□□ -1.7
USP25-207ENST00000464435 DESI2Q9BSY9 194 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 THUMPD3Q9BV44 507 aaKnown RBP4.42□□□□□ -1.7
USP25-207ENST00000464435 C1QTNF4Q9BXJ3 329 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 DDX31Q9H8H2 851 aaKnown RBP4.42□□□□□ -1.7
USP25-207ENST00000464435 PELI2Q9HAT8 420 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 CPSF3Q9UKF6 684 aaKnown RBP4.42□□□□□ -1.7
USP25-207ENST00000464435 POU2F3Q9UKI9 436 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 GTF3C4Q9UKN8 822 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 NME7Q9Y5B8 376 aa4.42□□□□□ -1.7
USP25-207ENST00000464435 MED19A0JLT2 244 aaPredicted RBP4.41□□□□□ -1.7
USP25-207ENST00000464435 ANXA2P2A6NMY6 339 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 FAM86B1E9PN63 330 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 CLDN4O14493 209 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 AP5Z1O43299 807 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 BAG4O95429 457 aaKnown RBP4.41□□□□□ -1.7
USP25-207ENST00000464435 FAM86B2P0C5J1 330 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 SMIM18P0DKX4 95 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 TCF4P15884 667 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 PDGFRAP16234 1089 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 LHX1P48742 406 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 ZNF132P52740 706 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 CAPZA1P52907 286 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 UBASH3AP57075 661 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 CX3CL1P78423 397 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 MAT1AQ00266 395 aaKnown RBP4.41□□□□□ -1.7
USP25-207ENST00000464435 EEF1A2Q05639 463 aaKnown RBP4.41□□□□□ -1.7
USP25-207ENST00000464435 COASYQ13057 564 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 DUOXA1Q1HG43 343 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 IZUMO4Q1ZYL8 232 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 MDH1BQ5I0G3 518 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 TCTE1Q5JU00 501 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 MFSD6Q6ZSS7 791 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 KCTD8Q6ZWB6 473 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 NUP54Q7Z3B4 507 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 ARHGAP22Q7Z5H3 698 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 RDM1Q8NG50 284 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 OLIG1Q8TAK6 271 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 FGFBP3Q8TAT2 258 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 MOB3AQ96BX8 217 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 ABHD8Q96I13 439 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 IGSF21Q96ID5 467 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 C17orf77Q96MU5 243 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 SPATA33Q96N06 139 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 FNBP1Q96RU3 617 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 FEVQ99581 238 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 CITED2Q99967 270 aaPredicted RBP4.41□□□□□ -1.7
USP25-207ENST00000464435 RSPH9Q9H1X1 276 aaPredicted RBP4.41□□□□□ -1.7
USP25-207ENST00000464435 ARRDC1-AS1Q9H2J1 176 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 SLC38A7Q9NVC3 462 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 B3GAT1Q9P2W7 334 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 LRWD1Q9UFC0 647 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 POLLQ9UGP5 575 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 MTUS1Q9ULD2 1270 aa4.41□□□□□ -1.7
USP25-207ENST00000464435 GREB1LQ9C091 1923 aaPredicted RBP4.4□□□□□ -1.7
USP25-207ENST00000464435 NEMP2A6NFY4 417 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 ENO4A6NNW6 628 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 GAPDHSO14556 408 aaPredicted RBP4.4□□□□□ -1.71
USP25-207ENST00000464435 CTSVO60911 334 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 GBAP04062 536 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 FAM58BPP0C7Q3 252 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 HAPLN1P10915 354 aaPredicted RBP4.4□□□□□ -1.71
USP25-207ENST00000464435 ZNF23P17027 643 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 NR1D1P20393 614 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 BMXP51813 675 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 PRKCZQ05513 592 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 TUBB2AQ13885 445 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 PHLDA2Q53GA4 152 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 SYT14P1Q58G82 188 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 ZRANB3Q5FWF4 1079 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 C6orf136Q5SQH8 315 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 LINGO4Q6UY18 593 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 ZNF852Q6ZMS4 543 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 SPATA19Q7Z5L4 167 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 ABI3BPQ7Z7G0 1075 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 COMMD2Q86X83 199 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 CORO2AQ92828 525 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 FAM162AQ96A26 154 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 STAMBPL1Q96FJ0 436 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 FERMT1Q9BQL6 677 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 TRAF4Q9BUZ4 470 aaPredicted RBP4.4□□□□□ -1.71
USP25-207ENST00000464435 TUBB2BQ9BVA1 445 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 ZNF556Q9HAH1 456 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 APOBEC3GQ9HC16 384 aaKnown RBP4.4□□□□□ -1.71
USP25-207ENST00000464435 SERINC1Q9NRX5 453 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 TXLNGQ9NUQ3 528 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 ABCF3Q9NUQ8 709 aa4.4□□□□□ -1.71
USP25-207ENST00000464435 STK26Q9P289 416 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms