RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 MROH8Q9H579 483 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 RETREG1Q9H6L5 497 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NOL6Q9H6R4 1146 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NEK6Q9HC98 313 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 FBRSL1Q9HCM7 1045 aaKnown RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ATP13A1Q9HD20 1204 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC52A3Q9NQ40 469 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 DYRK4Q9NR20 520 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CATSPERZQ9NTU4 200 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ASIC5Q9NY37 505 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 UBP1Q9NZI7 540 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NUDT4Q9NZJ9 180 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 ADGRE2Q9UHX3 823 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 CFL2Q9Y281 166 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 BTBD3Q9Y2F9 522 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 GMPPBQ9Y5P6 360 aa7.06□□□□□ -1.28
CLSTN1-204ENST00000464286 SCN1AP35498 2009 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ANKRD34BA5PLL1 514 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 METTL15A6NJ78 407 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 H0Y858 1186 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 UPK1AO00322 258 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CXCR6O00574 342 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 STX7O15400 261 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ZW10O43264 779 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 AIREO43918 545 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 KLK8O60259 260 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 TRIM3O75382 744 aaPredicted RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 RHOBTB1O94844 696 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 INMTO95050 263 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 OTCP00480 354 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 RPLP0P05388 317 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 IQCF3P0C7M6 154 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 PCNAP12004 261 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 HOXD8P13378 290 aaPredicted RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 NCK1P16333 377 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CD36P16671 472 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 IL7RP16871 459 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 EFNA1P20827 205 aaPredicted RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 KCNA5P22460 613 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 RPL10P27635 214 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 MAPK1P28482 360 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 DNAJA1P31689 397 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 DDOSTP39656 456 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 DCTP40126 519 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CTSKP43235 329 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 RPS5P46782 204 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 NRIP1P48552 1158 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 MAPK10P53779 464 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 OR4D2P58180 307 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CYP4F3Q08477 520 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CSTF3Q12996 717 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 DNASE1L3Q13609 305 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 TBCEQ15813 527 aaPredicted RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 MAPKAPK3Q16644 382 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 INAVAQ3KP66 663 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ADPRMQ3LIE5 342 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 LRIT3Q3SXY7 679 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 INO80DQ53TQ3 878 aaPredicted RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 XKR4Q5GH76 650 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ARMCX4Q5H9R4 360 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 TPRG1LQ5T0D9 272 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 MARC1Q5VT66 337 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 SYPL2Q5VXT5 272 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 KIAA1614Q5VZ46 1190 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 AFTPHQ6ULP2 937 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 KDELC1Q6UW63 502 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ALKAL1Q6UXT8 129 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 TMC5Q6UXY8 1006 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CYHR1Q6ZMK1 362 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 CLEC20AQ6ZU45 233 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 GPR149Q86SP6 731 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 METTL23Q86XA0 190 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 WFDC8Q8IUA0 241 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 P3H2Q8IVL5 708 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 PEX5LQ8IYB4 626 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 SPATA6LQ8N4H0 392 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF540Q8NDQ6 660 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 PPTC7Q8NI37 304 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC13A3Q8WWT9 602 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 FIG4Q92562 907 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 NCLNQ969V3 563 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 C1orf74Q96LT6 269 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 C3orf30Q96M34 536 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 DEPDC7Q96QD5 511 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 TRIB3Q96RU7 358 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ATOH8Q96SQ7 321 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 AARSD1Q9BTE6 412 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 THUMPD3Q9BV44 507 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 SLIRPQ9GZT3 109 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 NXF2Q9GZY0 626 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 NUAK2Q9H093 628 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 NXF3Q9H4D5 531 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 MARCH7Q9H992 704 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ACOT13Q9NPJ3 140 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 TLR9Q9NR96 1032 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 ABCB10Q9NRK6 738 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 PLCXD1Q9NUJ7 323 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 DDX28Q9NUL7 540 aaKnown RBP7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 OSER1Q9NX31 292 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms