RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 DSN1Q9H410 356 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 MRM3Q9HC36 420 aaKnown RBP15.52■□□□□ 0.08
SMC4-204ENST00000462787 RDH8Q9NYR8 311 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 HSPE1-MOB4S4R3N1 261 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 PRKACGP22612 351 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 STOMP27105 288 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 DGKQP52824 942 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 NIPAL4Q0D2K0 466 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 PPP1R8Q12972 351 aaKnown RBP15.52■□□□□ 0.08
SMC4-204ENST00000462787 TAC4Q86UU9 113 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 OOSP2Q86WS3 158 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 SLC30A8Q8IWU4 369 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 OR13J1Q8NGT2 312 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 POF1BQ8WVV4 589 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 FTHL17Q9BXU8 183 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 TBC1D17Q9HA65 648 aa15.52■□□□□ 0.08
SMC4-204ENST00000462787 A0A0G2JPF8 293 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 ANKRD33BA6NCL7 494 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 HNRNPCL3B7ZW38 293 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 LRG1P02750 347 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 ALDH2P05091 517 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 HNRNPCL4P0DMR1 293 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 ARHGAP15Q53QZ3 475 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 FBXL19Q6PCT2 694 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 SIDT2Q8NBJ9 832 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 OR8J3Q8NGG0 315 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 FZD8Q9H461 694 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 WDR70Q9NW82 654 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 RUVBL1Q9Y265 456 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 IFNGP01579 166 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 FGBP02675 491 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 GTF2E2P29084 291 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 ERP29P30040 261 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 RPIAP49247 311 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 EPHB3P54753 998 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 SNRPD1P62314 119 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 EMX2Q04743 252 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 TFAP2CQ92754 450 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 ESAMQ96AP7 390 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 PIWIL1Q96J94 861 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 FAM118AQ9NWS6 357 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 ERVK-18Q9QC07 812 aa15.52■□□□□ 0.07
SMC4-204ENST00000462787 SETD1AO15047 1707 aaKnown RBP15.52■□□□□ 0.07
SMC4-204ENST00000462787 MSI1O43347 362 aaKnown RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 MYCP01106 439 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 ZNF132P52740 706 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 PPP1R3AQ16821 1122 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 ZNF697Q5TEC3 545 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 FAM171A1Q5VUB5 890 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 PNCKQ6P2M8 343 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 TNFAIP8L1Q8WVP5 186 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 LHPPQ9H008 270 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 DPAGT1Q9H3H5 408 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 A8MV72 311 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 NME6O75414 186 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 F7P08709 466 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 DPEP1P16444 411 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 CTPS1P17812 591 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 ITPKAP23677 461 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 CSTF1Q05048 431 aaKnown RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 GRIK2Q13002 908 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 ADAM15Q13444 863 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 SEMA3AQ14563 771 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 SLC10A6Q3KNW5 377 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 GARNL3Q5VVW2 1013 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 PAQR3Q6TCH7 311 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 ZNF730Q6ZMV8 503 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 ZNF367Q7RTV3 350 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 C2CD4AQ8NCU7 369 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 CLEC4AQ9UMR7 237 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 PRPS1L1P21108 318 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 MATN1P21941 496 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 IL10RBQ08334 325 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 TAF1CQ15572 869 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 IDNKQ5T6J7 187 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 CMTR2Q8IYT2 770 aaKnown RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 PJA1Q8NG27 643 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 EMID1Q96A84 441 aaPredicted RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 TWNKQ96RR1 684 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 SLA2Q9H6Q3 261 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 THUMPD1Q9NXG2 353 aaKnown RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 TVP23BQ9NYZ1 205 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 RIMS3Q9UJD0 308 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 STYXL1Q9Y6J8 313 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 MYH6P13533 1939 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 PRORSD1PA6NEY8 169 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 VILLO15195 856 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 RPS3P23396 243 aaKnown RBP eCLIP15.51■□□□□ 0.077e-64■■■■■ 337.8
SMC4-204ENST00000462787 CHRNA4P43681 627 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 MAPK9P45984 424 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 ZNF33AQ06730 810 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 CLCA4Q14CN2 919 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 CRY2Q49AN0 593 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 MMAAQ8IVH4 418 aaKnown RBP15.51■□□□□ 0.07
SMC4-204ENST00000462787 SACM1LQ9NTJ5 587 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 MAP4K5Q9Y4K4 846 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 RAI2Q9Y5P3 530 aa15.51■□□□□ 0.07
SMC4-204ENST00000462787 C12orf71A8MTZ7 269 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms