RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 CHERPQ8IWX8 916 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 NCOA7Q8NI08 942 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 CTCFLQ8NI51 663 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 IGSF8Q969P0 613 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 RRNAD1Q96FB5 475 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 BICD1Q96G01 975 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 CTAGE1Q96RT6 745 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 CDCA3Q99618 268 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 NCAPGQ9BPX3 1015 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 TREX2Q9BQ50 279 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 PCGF1Q9BSM1 259 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 GLT8D2Q9H1C3 349 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 PDZD7Q9H5P4 517 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 RANGRFQ9HD47 186 aaPredicted RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 SETD4Q9NVD3 440 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 CNOT8Q9UFF9 292 aaKnown RBP4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 MAD2L2Q9UI95 211 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 TINAGQ9UJW2 476 aa4.35□□□□□ -1.71
PRPF4B-202ENST00000461612 MYH1P12882 1939 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 RLFQ13129 1914 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ALPK3Q96L96 1907 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 MAGEA13PA6NCF6 341 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CCDC69A6NI79 296 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 SRRM3A6NNA2 597 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 MBTPS2O43462 519 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 HCRTR2O43614 444 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 JRKO75564 520 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 NKX2-2O95096 273 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CLDN14O95500 239 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 MLYCDO95822 493 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 MMP1P03956 469 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 PLA2G2AP14555 144 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 IL7RP16871 459 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 HOXB8P17481 243 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 TCF7P36402 384 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CLCNKAP51800 687 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 NAP1L1P55209 391 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 RRP1P56182 461 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ARF3P61204 181 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CSNK2A1P68400 391 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ARF1P84077 181 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 NUCB1Q02818 461 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CEBPZQ03701 1054 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ZNF155Q12901 538 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CRYMQ14894 314 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 EIF2S3LQ2VIR3 472 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ZNF585BQ52M93 769 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 SPOUT1Q5T280 376 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 FRG2Q64ET8 278 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CAPRIN2Q6IMN6 1127 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CFAP161Q6P656 301 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 SLC36A4Q6YBV0 504 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 GLDNQ6ZMI3 551 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CCNI2Q6ZMN8 369 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 DPPA4Q7L190 304 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 PLPPR4Q7Z2D5 763 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 C16orf82Q7Z2V1 217 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 TMCO2Q7Z6W1 182 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 FOXRED2Q8IWF2 684 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ANKRD52Q8NB46 1076 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 C1orf131Q8NDD1 294 aaKnown RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CSNK2A3Q8NEV1 391 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 RSPH1Q8WYR4 309 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 TANKQ92844 425 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ZNF689Q96CS4 500 aaPredicted RBP4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ADGRG7Q96K78 797 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 PPP1R13BQ96KQ4 1090 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ACOX2Q99424 681 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 SDF4Q9BRK5 362 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 SPZ1Q9BXG8 430 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ITPAQ9BY32 194 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 CPVLQ9H3G5 476 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 MAGIXQ9H6Y5 334 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 GAREM1Q9H706 876 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 TLE6Q9H808 572 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 PSTPIP2Q9H939 334 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 POLR1BQ9H9Y6 1135 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 STK39Q9UEW8 545 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 POLG2Q9UHN1 485 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 SIX4Q9UIU6 781 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 TUBE1Q9UJT0 475 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ACSL5Q9ULC5 683 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 NEDD4P46934 1319 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 ADGRA3Q8IWK6 1321 aa4.34□□□□□ -1.71
PRPF4B-202ENST00000461612 LAMA2P24043 3122 aaKnown RBP4.34□□□□□ -1.72
PRPF4B-202ENST00000461612 VCANP13611 3396 aa4.34□□□□□ -1.72
PRPF4B-202ENST00000461612 LTBP2Q14767 1821 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 FOCADQ5VW36 1801 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 DENND3A2RUS2 1198 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 MBLAC1A4D2B0 266 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 TMEM221A6NGB7 291 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 M0R296 226 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 GTPBP1O00178 669 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 VCYO14598 125 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 SPINT2O43291 252 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 HNRNPCL1O60812 293 aaKnown RBP4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 ZBTB11O95625 1053 aaPredicted RBP4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 PMS2P2O95744 297 aa4.33□□□□□ -1.72
PRPF4B-202ENST00000461612 CHRNA1P02708 482 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms