RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 GJC1P36383 396 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
TOP3A-202ENST00000461127 ARSEP51690 589 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 KCNK10P57789 538 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 PPIDQ08752 370 aaKnown RBP16.63■□□□□ 0.25
TOP3A-202ENST00000461127 SLC9A5Q14940 896 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 SLC14A2Q15849 920 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 RPUSD3Q6P087 351 aaKnown RBP16.63■□□□□ 0.25
TOP3A-202ENST00000461127 FAM151BQ6UXP7 276 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 POM121Q96HA1 1249 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 BTBD6Q96KE9 485 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 MAGEB10Q96LZ2 347 aaPredicted RBP16.63■□□□□ 0.25
TOP3A-202ENST00000461127 CCM2Q9BSQ5 444 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 TRIM8Q9BZR9 551 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 KLHL25Q9H0H3 589 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 UGT1A7Q9HAW7 530 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 UGT1A10Q9HAW8 530 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 UGT1A8Q9HAW9 530 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 SLC6A20Q9NP91 592 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 UVRAGQ9P2Y5 699 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 SPO11Q9Y5K1 396 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 DUSP10Q9Y6W6 482 aa16.63■□□□□ 0.25
TOP3A-202ENST00000461127 TRGV8A0A0C4DH27 118 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 GLYATL1P3A0A0U1RQE8 302 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 C2orf74A8MZ97 194 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 KIF5CO60282 957 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 POLBP06746 335 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 UMODP07911 640 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 PVRP15151 417 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 MMP11P24347 488 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 AP1B1Q10567 949 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 TESK1Q15569 626 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 NKAIN1Q4KMZ8 207 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 MRPL14Q6P1L8 145 aaKnown RBP16.62■□□□□ 0.25
TOP3A-202ENST00000461127 GFRALQ6UXV0 394 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 DET1Q7L5Y6 550 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 RNF10Q8N5U6 811 aaKnown RBP16.62■□□□□ 0.25
TOP3A-202ENST00000461127 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.62■□□□□ 0.252e-7■■■■□ 22.9
TOP3A-202ENST00000461127 CCDC120Q96HB5 630 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 VPS50Q96JG6 964 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 CALR3Q96L12 384 aaKnown RBP16.62■□□□□ 0.25
TOP3A-202ENST00000461127 RMDN2Q96LZ7 410 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 ALS2CR12Q96Q35 445 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 CEP41Q9BYV8 373 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 LHPPQ9H008 270 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 IRAK4Q9NWZ3 460 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 CDC23Q9UJX2 597 aa16.62■□□□□ 0.25
TOP3A-202ENST00000461127 MYO1FO00160 1098 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 BTN3A1O00481 513 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 CCL21O00585 134 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 PCDH17O14917 1159 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 ZSCAN9O15535 394 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-202ENST00000461127 SLC10A2Q12908 348 aaPredicted RBP16.61■□□□□ 0.25
TOP3A-202ENST00000461127 TCEAL1Q15170 157 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.61■□□□□ 0.25
TOP3A-202ENST00000461127 TLDC1Q6P9B6 456 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 XKRXQ6PP77 449 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 TMEM207Q6UWW9 146 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 ISLR2Q6UXK2 745 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 FERD3LQ96RJ6 166 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 DHCR7Q9UBM7 475 aaKnown RBP16.61■□□□□ 0.25
TOP3A-202ENST00000461127 PKP3Q9Y446 797 aa16.61■□□□□ 0.25
TOP3A-202ENST00000461127 BTN3A3O00478 584 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 GPR39O43194 453 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 CNOT3O75175 753 aaKnown RBP16.6■□□□□ 0.25
TOP3A-202ENST00000461127 PMPCBO75439 489 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 ATP13A4Q4VNC1 1196 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 CDH24Q86UP0 819 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 CFAP206Q8IYR0 622 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 ZNF655Q8N720 491 aaPredicted RBP16.6■□□□□ 0.25
TOP3A-202ENST00000461127 PQLC3Q8N755 202 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 C19orf47Q8N9M1 422 aaKnown RBP16.6■□□□□ 0.25
TOP3A-202ENST00000461127 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 SPATA22Q8NHS9 363 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 NR4A3Q92570 626 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 TADA1Q96BN2 335 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 RBM41Q96IZ5 413 aaKnown RBP16.6■□□□□ 0.25
TOP3A-202ENST00000461127 NDC1Q9BTX1 674 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 SPRTNQ9H040 489 aaPredicted RBP16.6■□□□□ 0.25
TOP3A-202ENST00000461127 TFB2MQ9H5Q4 396 aaKnown RBP16.6■□□□□ 0.25
TOP3A-202ENST00000461127 SMOXQ9NWM0 555 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 ACTR10Q9NZ32 417 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 HACD3Q9P035 362 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 IL17CQ9P0M4 197 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
TOP3A-202ENST00000461127 CCDC78A2IDD5 438 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 IFRD1O00458 451 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-202ENST00000461127 KCNN4O15554 427 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 DIAPH2O60879 1101 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 ALOX12BO75342 701 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 TDGF1P3P51864 188 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 FOXL2P58012 376 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 MFAP5Q13361 173 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 INAQ16352 499 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 DEFB110Q30KQ9 67 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 TUBB8Q3ZCM7 444 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 BCL7AQ4VC05 210 aa16.59■□□□□ 0.25
TOP3A-202ENST00000461127 ZNF324BQ6AW86 544 aaPredicted RBP16.59■□□□□ 0.25
TOP3A-202ENST00000461127 SPESP1Q6UW49 350 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms