RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 IQCDQ96DY2 449 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 CCDC114Q96M63 670 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 RPRD1AQ96P16 312 aaPredicted RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 EIF3CQ99613 913 aaKnown RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 NCAPGQ9BPX3 1015 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 CPPED1Q9BRF8 314 aaPredicted RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 FEM1AQ9BSK4 669 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 DDA1Q9BW61 102 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 SLC17A9Q9BYT1 436 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 TWSG1Q9GZX9 223 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 VPS16Q9H269 839 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 AKIRIN1Q9H9L7 192 aaPredicted RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 MBNL1Q9NR56 388 aaKnown RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 FAM207AQ9NSI2 230 aaPredicted RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 PIGVQ9NUD9 493 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 TAB2Q9NYJ8 693 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 LRIT1Q9P2V4 623 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 SLC25A13Q9UJS0 675 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 APPL1Q9UKG1 709 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 KLF2Q9Y5W3 355 aaPredicted RBP4.31□□□□□ -1.72
CNN3-204ENST00000461018 CACNA1CQ13936 2221 aa4.31□□□□□ -1.72
CNN3-204ENST00000461018 TLN2Q9Y4G6 2542 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ANK2Q01484 3957 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ANKRD62A6NC57 917 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 IGLON5A6NGN9 336 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 C2CD4BA6NLJ0 364 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 SIGLEC16A6NMB1 481 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 A8MU76 341 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 GOLGA6L6A8MZA4 724 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 KCNN4O15554 427 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 KDM1AO60341 852 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 GRAP2O75791 330 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 GFPT2O94808 682 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 IPO13O94829 963 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 ADCY5O95622 1261 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 LY86O95711 162 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 KRT3P12035 628 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 GZMAP12544 262 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 PDGFRAP16234 1089 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 CHRNB2P17787 502 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 CDK11BP21127 795 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 ALDH4A1P30038 563 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 SDC4P31431 198 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 PRKCIP41743 596 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 RABIFP47224 123 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 SULT1E1P49888 294 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ZNF135P52742 658 aaPredicted RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 THOP1P52888 689 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 LIMK2P53671 638 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 PITX1P78337 314 aaPredicted RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 FMO1Q01740 532 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 UBXN1Q04323 297 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 PTP4A2Q12974 167 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 NME3Q13232 169 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 HLTFQ14527 1009 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNN3-204ENST00000461018 TERF2Q15554 542 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ALG11Q2TAA5 492 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 MAP9Q49MG5 647 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 FILIP1LQ4L180 1135 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ATP13A4Q4VNC1 1196 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 DCAF10Q5QP82 559 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 CERCAMQ5T4B2 595 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 DCAF12Q5T6F0 453 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 FAM69BQ5VUD6 431 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 NAA35Q5VZE5 725 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 FRMD7Q6ZUT3 714 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 MRGPRGQ86SM5 289 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 PIM3Q86V86 326 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 KCNMB4Q86W47 210 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 SH2D3CQ8N5H7 860 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 PCDH20Q8N6Y1 951 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 ST6GALNAC3Q8NDV1 305 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 TMIEQ8NEW7 156 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 FDCSPQ8NFU4 85 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 CASKIN2Q8WXE0 1202 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 OR8D1Q8WZ84 308 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ST8SIA2Q92186 375 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ISG20Q96AZ6 181 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 TBCBQ99426 244 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 MNTQ99583 582 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 SYT11Q9BT88 431 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 ZYG11BQ9C0D3 744 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 TKTL2Q9H0I9 626 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 MAGEH1Q9H213 219 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 HSD3B7Q9H2F3 369 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 CXXC4Q9H2H0 198 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 LIME1Q9H400 295 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 CCM2LQ9NUG4 571 aaPredicted RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 ZNF212Q9UDV6 495 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 XPO7Q9UIA9 1087 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 VANGL2Q9ULK5 521 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 TMEM184BQ9Y519 407 aaPredicted RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 PCDHGA9Q9Y5G4 932 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 HS3ST4Q9Y661 456 aa4.3□□□□□ -1.72
CNN3-204ENST00000461018 COPG1Q9Y678 874 aaKnown RBP4.3□□□□□ -1.72
CNN3-204ENST00000461018 LRP4O75096 1905 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms