RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SLC22A18ASQ8N1D0 253 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TMEM151AQ8N4L1 468 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 OR13H1Q8NG92 308 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 DENND1AQ8TEH3 1009 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 KCNJ9Q92806 393 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TSACCQ96A04 125 aaPredicted RBP10.11□□□□□ -0.79
USP39-210ENST00000459775 UBXN10Q96LJ8 280 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 HSPA12BQ96MM6 686 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TTC1Q99614 292 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 FGF22Q9HCT0 170 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 ZNHIT2Q9UHR6 403 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 TRMT6Q9UJA5 497 aaKnown RBP10.11□□□□□ -0.79
USP39-210ENST00000459775 ST14Q9Y5Y6 855 aa10.11□□□□□ -0.79
USP39-210ENST00000459775 NEMP2A6NFY4 417 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PFDN6O15212 129 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 LAMTOR5O43504 91 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 VPS26AO75436 327 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 MPOP05164 745 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 CRABP2P29373 138 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PDHA2P29803 388 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 OXTRP30559 389 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PRKAR1BP31321 381 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 CSTF2P33240 577 aaKnown RBP eCLIP10.1□□□□□ -0.79
USP39-210ENST00000459775 CRHR1P34998 444 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PPARGP37231 505 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 INHBCP55103 352 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 DNAJC3Q13217 504 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 MAP7Q14244 749 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 SSPNQ14714 243 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 OR4D1Q15615 310 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 TAF1BQ53T94 588 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 FAM180BQ6P0A1 224 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 Q6ZSR6 202 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 OTOAQ7RTW8 1153 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 NLRP8Q86W28 1048 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 FSTL5Q8N475 847 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 TMEM145Q8NBT3 493 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 DTX3LQ8TDB6 740 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 ELMO1Q92556 727 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 EXT2Q93063 718 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 LINGO1Q96FE5 620 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PDXPQ96GD0 296 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 CNDP2Q96KP4 475 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 REPIN1Q9BWE0 567 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 ALG9Q9H6U8 611 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PRM3Q9NNZ6 103 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ATPIF1Q9UII2 106 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 VPS9D1Q9Y2B5 631 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PLLPQ9Y342 182 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 DHRS7Q9Y394 339 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 PCDHB1Q9Y5F3 818 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ATXN2Q99700 1313 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 NPEPPSL1A6NEC2 478 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 METTL12A8MUP2 240 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 FPGTO14772 594 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 POP7O75817 140 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 KLHL2O95198 593 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 WNT1P04628 370 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ADRB1P08588 477 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 OR56A5P0C7T3 313 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 CCT5P48643 541 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 BLVRAP53004 296 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 NFE2L1Q14494 772 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 TSNQ15631 228 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 USP39Q53GS9 565 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 CES4AQ5XG92 561 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ENPP7Q6UWV6 458 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 CHST15Q7LFX5 561 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 TBC1D1Q86TI0 1168 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 CFAP206Q8IYR0 622 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ZBTB2Q8N680 514 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ZNF540Q8NDQ6 660 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 OR1E3Q8WZA6 343 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 UCN2Q96RP3 112 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 NRTNQ99748 197 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 TCEAL2Q9H3H9 227 aaPredicted RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 CLK4Q9HAZ1 481 aaKnown RBP10.1□□□□□ -0.79
USP39-210ENST00000459775 ZSCAN32Q9NX65 697 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 SENP1Q9P0U3 644 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 GMEB2Q9UKD1 530 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ADAMTS6Q9UKP5 1117 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 ACTL7BQ9Y614 415 aa10.1□□□□□ -0.79
USP39-210ENST00000459775 SPEGQ15772 3267 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 A0A1W2PPC4 97 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CFAP99D6REC4 459 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PRPF4O43172 522 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP39-210ENST00000459775 HRO43593 1189 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PLIN3O60664 434 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 LRP3O75074 770 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 GUCA1CO95843 209 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 PROCP04070 461 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 FESP07332 822 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 RALBP11234 206 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 ACP5P13686 325 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 CD1DP15813 335 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 TYRP1P17643 537 aa10.09□□□□□ -0.79
USP39-210ENST00000459775 TFEBP19484 476 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms