RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 IGHV4-34P06331 123 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 NUDT1P36639 197 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 CCNG1P51959 295 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 PYCR3Q53H96 274 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 GCNT7Q6ZNI0 430 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 KLHDC8AQ8IYD2 350 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 TMEM145Q8NBT3 493 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 ATP6V1E2Q96A05 226 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 C19orf60Q96EN9 201 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 BMFQ96LC9 184 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 KCNA7Q96RP8 456 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 UHRF1Q96T88 793 aaPredicted RBP23.8■■□□□ 1.4
U2AF1-204ENST00000459639 ZDHHC5Q9C0B5 715 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 TXLNGQ9NUQ3 528 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 ACSL5Q9ULC5 683 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 SUFUQ9UMX1 484 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 DMTF1Q9Y222 760 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 HS3ST3A1Q9Y663 406 aa23.8■■□□□ 1.4
U2AF1-204ENST00000459639 E9PBE3 544 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 KLHL41O60662 606 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ATP5HO75947 161 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 OR4F21O95013 312 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 CHEK2O96017 543 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ENO1P06733 434 aaKnown RBP23.79■■□□□ 1.4
U2AF1-204ENST00000459639 RPS9P46781 194 aaKnown RBP23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ERVPABLB-1P60509 514 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 YPEL5P62699 121 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ZXDCQ2QGD7 858 aaPredicted RBP23.79■■□□□ 1.4
U2AF1-204ENST00000459639 PTCHD3Q3KNS1 767 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 CHST15Q7LFX5 561 aaPredicted RBP23.79■■□□□ 1.4
U2AF1-204ENST00000459639 HOMEZQ8IX15 550 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 CEP70Q8NHQ1 597 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 PKP4Q99569 1192 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 TUBB6Q9BUF5 446 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 NTMT1Q9BV86 223 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 CCDC106Q9BWC9 280 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 FGF22Q9HCT0 170 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 STOX2Q9P2F5 926 aaPredicted RBP23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ST14Q9Y5Y6 855 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 MYO1CO00159 1063 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ACP5P13686 325 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 SCTRP47872 440 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 LETMD1Q6P1Q0 360 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 GJD3Q8N144 294 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 OR4F6Q8NGB9 312 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 MAGEC3Q8TD91 643 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 WDR92Q96MX6 357 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 EBF2Q9HAK2 575 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 ARMCX1Q9P291 453 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 CA5BQ9Y2D0 317 aa23.79■■□□□ 1.4
U2AF1-204ENST00000459639 PLXND1Q9Y4D7 1925 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 IGHV1OR15-9A0A0B4J2B8 117 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 PRSS38A1L453 326 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 CAPN14A8MX76 684 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 PRAMEF26H0Y7S4 382 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 WDR47O94967 919 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 FSBPO95073 299 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 UNC5CO95185 931 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 HTR1BP28222 390 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 ARL1P40616 181 aaPredicted RBP23.78■■□□□ 1.4
U2AF1-204ENST00000459639 CCSMST1Q4G0I0 132 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 NXNQ6DKJ4 435 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 AGTRAPQ6RW13 159 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 MILR1Q7Z6M3 343 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 GPR174Q9BXC1 333 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 TPSD1Q9BZJ3 242 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 PFDN4Q9NQP4 134 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 DNAJC11Q9NVH1 559 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 MOSPD1Q9UJG1 213 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 LRP4O75096 1905 aa23.78■■□□□ 1.4
U2AF1-204ENST00000459639 KRT87PA6NCN2 255 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 PRR19A6NJB7 356 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 H0Y8X5 98 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 PIP5K1BO14986 540 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 SLC35G4P0C7Q5 338 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 EBLN1P0CF75 366 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 NCF2P19878 526 aaPredicted RBP23.77■■□□□ 1.4
U2AF1-204ENST00000459639 UBAP2LQ14157 1087 aaKnown RBP23.77■■□□□ 1.4
U2AF1-204ENST00000459639 CDYL2Q8N8U2 506 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 CDK15Q96Q40 435 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 CCT7Q99832 543 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 TUBB1Q9H4B7 451 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 MRPL40Q9NQ50 206 aaKnown RBP23.77■■□□□ 1.4
U2AF1-204ENST00000459639 TRPS1Q9UHF7 1281 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 ASF1AQ9Y294 204 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 TIMM22Q9Y584 194 aa23.77■■□□□ 1.4
U2AF1-204ENST00000459639 IFRD1O00458 451 aaPredicted RBP23.76■■□□□ 1.39
U2AF1-204ENST00000459639 STK25O00506 426 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 TNFRSF10CO14798 259 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 RPN2P04844 631 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 IMPA1P29218 277 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 GNPDA1P46926 289 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 FAM219BQ5XKK7 198 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 CAMKK1Q8N5S9 505 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 SNX31Q8N9S9 440 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 SPDYE1Q8NFV5 336 aaPredicted RBP23.76■■□□□ 1.39
U2AF1-204ENST00000459639 TFGQ92734 400 aaPredicted RBP23.76■■□□□ 1.39
U2AF1-204ENST00000459639 BIRC7Q96CA5 298 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 OR2M4Q96R27 311 aa23.76■■□□□ 1.39
U2AF1-204ENST00000459639 ATG10Q9H0Y0 220 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms