RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 LCP2Q13094 533 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 CCDC54Q8NEL0 328 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 BTBD19C9JJ37 291 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 MATN3O15232 486 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 SMPD1P17405 629 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 JAM2P57087 298 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 FKBP1AP62942 108 aaKnown RBP19.32■□□□□ 0.68
SNX27-204ENST00000458013 BNIP1Q12981 228 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 BMT2Q1RMZ1 405 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 ANKRD26P1Q6NSI1 321 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 FUT10Q6P4F1 479 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 AMIGO1Q86WK6 493 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 TMEM192Q8IY95 271 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 KXD1Q9BQD3 176 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 TCF7L1Q9HCS4 588 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 A0A1B0GVT2 93 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 B3GALT2O43825 422 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 ZNF823P16415 610 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 RHOQP17081 205 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 GRIA1P42261 906 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 CAP1Q01518 475 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 GPATCH1Q9BRR8 931 aaKnown RBP19.32■□□□□ 0.68
SNX27-204ENST00000458013 ERVK-11Q9UQG0 969 aa19.32■□□□□ 0.68
SNX27-204ENST00000458013 PCDHGA12O60330 932 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 ACSL1P33121 698 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 ASMTP46597 345 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 CCDC28BQ9BUN5 200 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 IFT80Q9P2H3 777 aaPredicted RBP19.31■□□□□ 0.68
SNX27-204ENST00000458013 TRPS1Q9UHF7 1281 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 CPNE3O75131 537 aaKnown RBP19.31■□□□□ 0.68
SNX27-204ENST00000458013 PTGIRP43119 386 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 HMGCS1Q01581 520 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 MROH2AA6NES4 1674 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 TRAFD1O14545 582 aaPredicted RBP19.31■□□□□ 0.68
SNX27-204ENST00000458013 ALPPP05187 535 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 CDKN1CP49918 316 aaPredicted RBP19.31■□□□□ 0.68
SNX27-204ENST00000458013 DAPL1A0PJW8 107 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 SLC35G6P0C7Q6 338 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 SELPP16109 830 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 SLC6A9P48067 706 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 C1QTNF8P60827 252 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 DEFA5Q01523 94 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 COPS7AQ9UBW8 275 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 AGLP35573 1532 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 MYOCOSA0A1B0GUC4 107 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 EFCAB9A8MZ26 197 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 PER2O15055 1255 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 DIRAS1O95057 198 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 ZNF234Q14588 700 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 KLHL26Q53HC5 615 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 IRF2BP1Q8IU81 584 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 C11orf65Q8NCR3 313 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 SCLYQ96I15 445 aa19.31■□□□□ 0.68
SNX27-204ENST00000458013 TTYH1Q9H313 450 aaPredicted RBP19.31■□□□□ 0.68
SNX27-204ENST00000458013 CFHP08603 1231 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CLCN7P51798 805 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 AIF1P55008 147 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 ELP6Q0PNE2 266 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 PPM1HQ9ULR3 514 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 LDB2O43679 373 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CHP2O43745 196 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 C8orf89P0DMQ9 161 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CD83Q01151 205 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 BRSK1Q8TDC3 778 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CXorf21Q9HAI6 301 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 DERAQ9Y315 318 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CDH15P55291 814 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 RPL6Q02878 288 aaKnown RBP19.3■□□□□ 0.68
SNX27-204ENST00000458013 ANKFN1Q8N957 763 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 TAMM41Q96BW9 452 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 IL4I1Q96RQ9 567 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 SPATA9Q9BWV2 254 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CLDN4O14493 209 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 B4GALT4O60513 344 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 SIX3O95343 332 aaPredicted RBP19.3■□□□□ 0.68
SNX27-204ENST00000458013 GRK6P43250 576 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 LAPTM4AQ15012 233 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 NXPE1Q8N323 547 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 GALNT15Q8N3T1 639 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 HERVK_113Q902F9 699 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 SNX27Q96L92 541 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 C7orf26Q96N11 449 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 EHD1Q9H4M9 534 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 EBF2Q9HAK2 575 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 BAIAP2Q9UQB8 552 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 ZNF99A8MXY4 864 aaPredicted RBP19.3■□□□□ 0.68
SNX27-204ENST00000458013 PLK4O00444 970 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 HCRTO43612 131 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 MSCO60682 206 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 CNPY1Q3B7I2 92 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 C4orf46Q504U0 113 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 VARS2Q5ST30 1063 aaKnown RBP19.3■□□□□ 0.68
SNX27-204ENST00000458013 EFHD2Q96C19 240 aaPredicted RBP19.3■□□□□ 0.68
SNX27-204ENST00000458013 CENPNQ96H22 339 aaPredicted RBP19.3■□□□□ 0.68
SNX27-204ENST00000458013 C8orf48Q96LL4 319 aa19.3■□□□□ 0.68
SNX27-204ENST00000458013 GRXCR1A8MXD5 290 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 NIPSNAP2O75323 286 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 RPLP0P05388 317 aaKnown RBP19.29■□□□□ 0.68
SNX27-204ENST00000458013 EDNRAP25101 427 aa19.29■□□□□ 0.68
SNX27-204ENST00000458013 HFE2Q6ZVN8 426 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms