RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 DDOSTP39656 456 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 CAP2P40123 477 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 ETV3P41162 512 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 CYP4F2P78329 520 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 TNFAIP2Q03169 654 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 CYP4F3Q08477 520 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 FAPQ12884 760 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 PPIL2Q13356 520 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 NFE2L1Q14494 772 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 BOLA3Q53S33 107 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF691Q5VV52 312 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 HEATR6Q6AI08 1181 aaKnown RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 LCLAT1Q6UWP7 414 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC22A9Q8IVM8 553 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC44A2Q8IWA5 706 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 NETO1Q8TDF5 533 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 TOP1MTQ969P6 601 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 VTI1AQ96AJ9 217 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 COQ8BQ96D53 544 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 REPS1Q96D71 796 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 ZHX1-C8orf76Q96EF9 292 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 SENP8Q96LD8 212 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF670Q9BS34 389 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 C6orf62Q9GZU0 229 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 HPS4Q9NQG7 708 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 ANKEF1Q9NU02 776 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 PRMT7Q9NVM4 692 aaPredicted RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 SLCO1C1Q9NYB5 712 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 SH3BP4Q9P0V3 963 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 NDRG4Q9ULP0 352 aaKnown RBP4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 CDYLQ9Y232 598 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 IRAK3Q9Y616 596 aa4.45□□□□□ -1.7
DEPDC1-202ENST00000456315 HACD1B0YJ81 288 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 B8ZZF3 427 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 M0R3G1 203 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDH17O14917 1159 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC16A6O15403 523 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FKBP9O95302 570 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 KRT19P08727 400 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MSL3P1P0C860 447 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 EFNA1P20827 205 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC26A3P40879 764 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CDKN2CP42773 168 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 STX5Q13190 355 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ACOX1Q15067 660 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DUOXA2Q1HG44 320 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF699Q32M78 642 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 C6orf136Q5SQH8 315 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF678Q5SXM1 525 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GPR151Q8TDV0 419 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 JPH3Q8WXH2 748 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 USP7Q93009 1102 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 C19orf60Q96EN9 201 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC25A23Q9BV35 468 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 QTRT2Q9H974 415 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GALNT9Q9HCQ5 603 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TRPM5Q9NZQ8 1165 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ANKRD31Q8N7Z5 1873 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 LACTBL1A8MY62 500 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 EFCAB9A8MZ26 197 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CDC7O00311 574 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 POLBP06746 335 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 NUDT7P0C024 238 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 GJA1P17302 382 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SPRP35270 261 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MAXP61244 160 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ENPEPQ07075 957 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FZD5Q13467 585 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 NAB1Q13506 487 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TUBA3CQ13748 450 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DSC3Q14574 896 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 EMC2Q15006 297 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 HABP4Q5JVS0 413 aaKnown RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TPRG1LQ5T0D9 272 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 LETMD1Q6P1Q0 360 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM198BQ6UWH4 519 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 B3GLCTQ6Y288 498 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TSPYL5Q86VY4 417 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ARHGAP12Q8IWW6 846 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 PIANPQ8IYJ0 282 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TBC1D21Q8IYX1 336 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CLEC4FQ8N1N0 589 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DNAAF3Q8N9W5 541 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 RNF149Q8NC42 400 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 RNF139Q8WU17 664 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 COPS5Q92905 334 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC10A4Q96EP9 437 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 MYEOVQ96EZ4 313 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 TM9SF2Q99805 663 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 BCL7BQ9BQE9 202 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 CHCHD6Q9BRQ6 235 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 C9orf16Q9BUW7 83 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 DNAI2Q9GZS0 605 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 FAM49AQ9H0Q0 323 aaPredicted RBP4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ING2Q9H160 280 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 RNF39Q9H2S5 420 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC38A10Q9HBR0 1119 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 ZFP64Q9NPA5 681 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 SERHLQ9NQF3 203 aa4.44□□□□□ -1.7
DEPDC1-202ENST00000456315 EHD3Q9NZN3 535 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms