RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 HMGCS1Q01581 520 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 MAPKAPK3Q16644 382 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 SLC36A3Q495N2 470 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 USP39Q53GS9 565 aaKnown RBP14.73□□□□□ -0.05
LDLR-202ENST00000455727 MBOAT1Q6ZNC8 495 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 EP400NLQ6ZTU2 488 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 NEK10Q6ZWH5 1172 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 RTL10Q7L3V2 364 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 FAM9CQ8IZT9 166 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 LIX1Q8N485 282 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 DTWD1Q8N5C7 304 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 TNIP2Q8NFZ5 429 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 OR2A12Q8NGT7 310 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 CLP1Q92989 425 aaKnown RBP14.73□□□□□ -0.05
LDLR-202ENST00000455727 RMND5BQ96G75 393 aaPredicted RBP14.73□□□□□ -0.05
LDLR-202ENST00000455727 HIST1H2AHQ96KK5 128 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 ZNF583Q96ND8 569 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 HIST1H2AJQ99878 128 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 H2AFJQ9BTM1 129 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 BDH2Q9BUT1 245 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 ADI1Q9BV57 179 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 BBS2Q9BXC9 721 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 GRIP2Q9C0E4 1043 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 GORASP2Q9H8Y8 452 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 ACTR8Q9H981 624 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 SLC8A2Q9UPR5 921 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 CROCCQ5TZA2 2017 aa14.73□□□□□ -0.05
LDLR-202ENST00000455727 TRIM43BA6NCK2 446 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 NEDD8-MDP1E9PL57 170 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 NPIPB8E9PQR5 432 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 KIAA0355O15063 1070 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 PGRP06401 933 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 ZNF23P17027 643 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 SLC6A12P48065 614 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 MTPNP58546 118 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 DCDC1P59894 354 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 LSAMPQ13449 338 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 SELPLGQ14242 412 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 MAP7Q14244 749 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 AAK1Q2M2I8 961 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 FAM174BQ3ZCQ3 159 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 ELMSAN1Q6PJG2 1045 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 ISLR2Q6UXK2 745 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 RBM44Q6ZP01 1051 aaKnown RBP14.72□□□□□ -0.05
LDLR-202ENST00000455727 Q6ZVU0 165 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 KIAA0907Q7Z7F0 614 aaPredicted RBP14.72□□□□□ -0.05
LDLR-202ENST00000455727 ADIPOR2Q86V24 386 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 ALDH16A1Q8IZ83 802 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 CHST14Q8NCH0 376 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 TRIM43Q96BQ3 446 aaPredicted RBP14.72□□□□□ -0.05
LDLR-202ENST00000455727 MAGEB10Q96LZ2 347 aaPredicted RBP14.72□□□□□ -0.05
LDLR-202ENST00000455727 SH3GL3Q99963 347 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 CHID1Q9BWS9 393 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 CLK4Q9HAZ1 481 aaKnown RBP14.72□□□□□ -0.05
LDLR-202ENST00000455727 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 HCFC1R1Q9NWW0 138 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 VAPAQ9P0L0 249 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 SNX6Q9UNH7 406 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 DMTF1Q9Y222 760 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 MYOCOSA0A1B0GUC4 107 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 SERTM1A2A2V5 107 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 PLOD2O00469 737 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 ANXA6P08133 673 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 ACRP10323 421 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 CYP2A6P11509 494 aaPredicted RBP14.72□□□□□ -0.05
LDLR-202ENST00000455727 HSPA14Q0VDF9 509 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 L3MBTL4Q8NA19 623 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 FAM47BQ8NA70 645 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 OR52E4Q8NGH9 312 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 TLR9Q9NR96 1032 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 SPHK2Q9NRA0 654 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 TBC1D14Q9P2M4 693 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 PLXNA2O75051 1894 aa14.72□□□□□ -0.05
LDLR-202ENST00000455727 KCNE1BA0A087WTH5 132 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 MOSPD3O75425 235 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 GMNNO75496 209 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 AP2A2O94973 939 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 PRSS23O95084 383 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 BCKDHAP12694 445 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 TYRP14679 529 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 RECQLP46063 649 aaPredicted RBP14.71□□□□□ -0.05
LDLR-202ENST00000455727 AP1S2P56377 157 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 BOP1Q14137 746 aaKnown RBP14.71□□□□□ -0.05
LDLR-202ENST00000455727 LRRC26Q2I0M4 334 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 ZXDCQ2QGD7 858 aaPredicted RBP14.71□□□□□ -0.05
LDLR-202ENST00000455727 KCTD21Q4G0X4 260 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 ARHGAP15Q53QZ3 475 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 SGO1Q5FBB7 561 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 SUSD1Q6UWL2 747 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 RASGRP3Q8IV61 690 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 LEMD2Q8NC56 503 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 ZFP28Q8NHY6 868 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 NUDT8Q8WV74 236 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 ACPTQ9BZG2 426 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 PIF1Q9H611 641 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 CAAP1Q9H8G2 361 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 ZFP14Q9HCL3 533 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 RAD18Q9NS91 495 aa14.71□□□□□ -0.05
LDLR-202ENST00000455727 TUBA8Q9NY65 449 aaPredicted RBP14.71□□□□□ -0.05
LDLR-202ENST00000455727 PTTG2Q9NZH5 202 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms