RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SH3BP2P78314 561 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 XIAPP98170 497 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 IFFO1Q0D2I5 559 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 ABHD18Q0P651 414 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 SEPT6Q14141 434 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 CYB5D1Q6P9G0 228 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 CAPN12Q6ZSI9 719 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 TIPARPQ7Z3E1 657 aaKnown RBP17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 PRSS42Q7Z5A4 293 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 SNX20Q7Z614 316 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 ESX1Q8N693 406 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 ELMO2Q96JJ3 720 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 C12orf66Q96MD2 445 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 COPS8Q99627 209 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 FAM117AQ9C073 453 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 RAB33BQ9H082 229 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 FAM96AQ9H5X1 160 aa17.56■□□□□ 0.4
SQSTM1-204ENST00000453046 EXOC1LA0A1B0GW35 172 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 MROH6A6NGR9 719 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 J3QKU1 62 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 SLC35G4P0C7Q5 338 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 PAMP19021 973 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 ARL4DP49703 201 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 ZNF140P52738 457 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 ZNF844Q08AG5 666 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 NAB1Q13506 487 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 KRT33BQ14525 404 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 IL11RAQ14626 422 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 ANKRD20A4Q4UJ75 823 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 BCL7AQ4VC05 210 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 ZRANB3Q5FWF4 1079 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 KIAA0930Q6ICG6 404 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 BORAQ6PGQ7 559 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 CFAP206Q8IYR0 622 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 NXPE1Q8N323 547 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 FBF1Q8TES7 1133 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 HEXDCQ8WVB3 486 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 KLHL6Q8WZ60 621 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 RNF31Q96EP0 1072 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 SLC45A3Q96JT2 553 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 INSM2Q96T92 566 aaPredicted RBP17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 CYTH2Q99418 400 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 TREX1Q9NSU2 369 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
SQSTM1-204ENST00000453046 ZCWPW2A0A1B0GU75 182 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 CCL22O00626 93 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 LDB2O43679 373 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 SLC28A2O43868 658 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 DLGAP3O95886 979 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 SHBGP04278 402 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 ATP1B2P14415 290 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 MC4RP32245 332 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 TSTD2Q5T7W7 516 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 ARMC6Q6NXE6 501 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 C6orf15Q6UXA7 325 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 TAS2R42Q7RTR8 314 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 PRICKLE2Q7Z3G6 844 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 PPP1R3BQ86XI6 285 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 RIBC1Q8N443 379 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 SIDT2Q8NBJ9 832 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 UHMK1Q8TAS1 419 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 MFSD3Q96ES6 412 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 CERS2Q96G23 380 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 DNAJC1Q96KC8 554 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 LINC00615Q96LM1 132 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 CATSPER2Q96P56 530 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 C19orf43Q9BQ61 176 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 TRIM56Q9BRZ2 755 aaKnown RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 ROPN1BQ9BZX4 212 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 ROPN1Q9HAT0 212 aaPredicted RBP17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 PDE7BQ9NP56 450 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 CHRAC1Q9NRG0 131 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 MOCS1Q9NZB8 636 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 COLEC10Q9Y6Z7 277 aa17.54■□□□□ 0.4
SQSTM1-204ENST00000453046 UBA6A0AVT1 1052 aaPredicted RBP17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 GOLGA6L10A6NI86 522 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 FAM159BA6NKW6 160 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 AGAP14A8MT82 685 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 NKX2-8O15522 239 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 KIAA0754O94854 1291 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 C1QAP02745 245 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 PRKAR1AP10644 381 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 NELFEP18615 380 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 PSMA3P25788 255 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 NMBRP28336 390 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 PPP1CAP62136 330 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 MC1RQ01726 317 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 ACVR1Q04771 509 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 GPS2Q13227 327 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 MAP7Q14244 749 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 RASA2Q15283 850 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 GPR33Q49SQ1 333 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 CEP85LQ5SZL2 805 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 DUS1LQ6P1R4 473 aaKnown RBP17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 OOSP2Q86WS3 158 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 TDRPQ86YL5 185 aa17.53■□□□□ 0.4
SQSTM1-204ENST00000453046 CNPY4Q8N129 248 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms