RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 BAG2O95816 211 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 TRUB2O95900 331 aaKnown RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 TIMP1P01033 207 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HIST1H2ABP04908 130 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 LCKP06239 509 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 FYNP06241 537 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 MMP2P08253 660 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 ACTN1P12814 892 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 UNGP13051 313 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HIST1H2ADP20671 130 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HOXC8P31273 242 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 GPR143P51810 404 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 PPP2R2BQ00005 443 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 YWHAHQ04917 246 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 RARS2Q5T160 578 aaKnown RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 DAB2IPQ5VWQ8 1189 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 IYDQ6PHW0 289 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HIST3H2AQ7L7L0 130 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 IRF2BP2Q7Z5L9 587 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 SDCCAG8Q86SQ7 713 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 TLK2Q86UE8 772 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 TSPAN33Q86UF1 283 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 TMC8Q8IU68 726 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 ARID3BQ8IVW6 561 aaPredicted RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 CAMKVQ8NCB2 501 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 KLHDC9Q8NEP7 349 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 MOSPD2Q8NHP6 518 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 SNAPC3Q92966 411 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HDAC11Q96DB2 347 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 CDHR1Q96JP9 859 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 CCDC114Q96M63 670 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 HARBI1Q96MB7 349 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 GUCD1Q96NT3 240 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 FAM110AQ9BQ89 295 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
LINC00393-202ENST00000452852 COPG2Q9UBF2 871 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 CCPG1Q9ULG6 757 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 ZNF148Q9UQR1 794 aa4.29□□□□□ -1.72
LINC00393-202ENST00000452852 RAD50Q92878 1312 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 EDDM13A0A1B0GTR0 161 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 C17orf102A2RUQ5 167 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 A4D1N5 150 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 OR6C76A6NM76 312 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 PRPF4O43172 522 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 KCNK5O95279 499 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ICAM1P05362 532 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CYC1P08574 325 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 TMEM191BP0C7N4 346 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CBSLP0DN79 551 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 TOP1P11387 765 aaKnown RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 PCP11498 1178 aaKnown RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 TNFSF8P32971 234 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CBSP35520 551 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 HNF4AP41235 474 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 RAB28P51157 221 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 SNAP25P60880 206 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CNTN2Q02246 1040 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 AP1B1Q10567 949 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ITGA7Q13683 1181 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 LPIN1Q14693 890 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 MCMDC2Q4G0Z9 681 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 AWAT2Q6E213 333 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 TMEM211Q6ICI0 200 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 PSRC1Q6PGN9 363 aaPredicted RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CXCL17Q6UXB2 119 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ZNF793Q6ZN11 406 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 PQLC2Q6ZP29 291 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 FAM57BQ71RH2 274 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ERN2Q76MJ5 926 aaKnown RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 DPPA4Q7L190 304 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 LINGO2Q7L985 606 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 LDB1Q86U70 411 aaPredicted RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ADIPOR2Q86V24 386 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 DENND6AQ8IWF6 608 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 DDIASQ8IXT1 998 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 SIX6OS1Q8N1H7 587 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 SLC25A41Q8N5S1 370 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 FAM133AQ8N9E0 248 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 BEST2Q8NFU1 509 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CFAP61Q8NHU2 1237 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 BCAS4Q8TDM0 211 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 MR1Q95460 341 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 FAM162AQ96A26 154 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 EME1Q96AY2 570 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ZFYVE19Q96K21 471 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ACOX2Q99424 681 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CDX2Q99626 313 aaPredicted RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 PCGF1Q9BSM1 259 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 SEZ6LQ9BYH1 1024 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 NPFFR1Q9GZQ6 430 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 DNAI2Q9GZS0 605 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 UPF3AQ9H1J1 476 aaKnown RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 FOXP1Q9H334 677 aaPredicted RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 RNF41Q9H4P4 317 aaPredicted RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 SPAG4Q9NPE6 437 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 PAPOLBQ9NRJ5 636 aaKnown RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 TMEM45AQ9NWC5 275 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
LINC00393-202ENST00000452852 CISD1Q9NZ45 108 aaKnown RBP4.28□□□□□ -1.72
LINC00393-202ENST00000452852 ERVK-11Q9UQG0 969 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms