RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 RBMS1P29558 406 aaKnown RBP19.38■□□□□ 0.69
COL9A3-202ENST00000452372 CSTF2P33240 577 aaKnown RBP eCLIP19.38■□□□□ 0.69
COL9A3-202ENST00000452372 CLCN7P51798 805 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 ABRQ12979 859 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 GBX1Q14549 363 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 UNC5DQ6UXZ4 953 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 CLEC14AQ86T13 490 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 PALM2Q8IXS6 379 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 SNRNP27Q8WVK2 155 aaKnown RBP19.38■□□□□ 0.69
COL9A3-202ENST00000452372 KCNJ9Q92806 393 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 FAM136AQ96C01 138 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 TGM7Q96PF1 710 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 AARSD1Q9BTE6 412 aaKnown RBP19.38■□□□□ 0.69
COL9A3-202ENST00000452372 FAM114A2Q9NRY5 505 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 KLHL3Q9UH77 587 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 DMGDHQ9UI17 866 aaKnown RBP19.38■□□□□ 0.69
COL9A3-202ENST00000452372 MED16Q9Y2X0 877 aa19.38■□□□□ 0.69
COL9A3-202ENST00000452372 OR6C74A6NCV1 312 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 TNFSF15O95150 251 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 ANKRD34CP0C6C1 535 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 ATP5DP30049 168 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 MGAT5Q09328 741 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 IRGCQ6NXR0 463 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 OOSP2Q86WS3 158 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 ZBTB2Q8N680 514 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 HGH1Q9BTY7 390 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 SRMSQ9H3Y6 488 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 ZDHHC18Q9NUE0 388 aa19.37■□□□□ 0.69
COL9A3-202ENST00000452372 EIF4E1BA6NMX2 242 aaKnown RBP19.36■□□□□ 0.69
COL9A3-202ENST00000452372 AGRPO00253 132 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 RPN2P04844 631 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 ITGA2BP08514 1039 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 CCL4P13236 92 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 ITIH1P19827 911 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 TMPRSS3P57727 454 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 ARHGAP40Q5TG30 622 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 CYS1Q717R9 158 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 AMIGO1Q86WK6 493 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 CFAP61Q8NHU2 1237 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 ZFATQ9P243 1243 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 SEMA5BQ9P283 1151 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 SLC17A6Q9P2U8 582 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 PISDQ9UG56 409 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 DHRS7Q9Y394 339 aa19.36■□□□□ 0.69
COL9A3-202ENST00000452372 EFSO43281 561 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 KIF1CO43896 1103 aaKnown RBP19.35■□□□□ 0.69
COL9A3-202ENST00000452372 KDM1AO60341 852 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 GSTA2P09210 222 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 TPBGLP0DKB5 382 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 FGF3P11487 239 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-202ENST00000452372 SSTR1P30872 391 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 ETV5P41161 510 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 MAGEA4P43358 317 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 PPP1CAP62136 330 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 TTLL9Q3SXZ7 439 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 ACSBG2Q5FVE4 666 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 CACHD1Q5VU97 1274 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 ARMC6Q6NXE6 501 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 FAM92BQ6ZTR7 304 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 PRSS42Q7Z5A4 293 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 CCDC25Q86WR0 208 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 SIDT2Q8NBJ9 832 aaKnown RBP19.35■□□□□ 0.69
COL9A3-202ENST00000452372 SKA2Q8WVK7 121 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-202ENST00000452372 INPP5DQ92835 1189 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 CD180Q99467 661 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 GPR21Q99679 349 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 SLC30A3Q99726 388 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 NRTNQ99748 197 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 FAM129AQ9BZQ8 928 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 OCIAD1Q9NX40 245 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 ICKQ9UPZ9 632 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 TDRKHQ9Y2W6 561 aaKnown RBP19.35■□□□□ 0.69
COL9A3-202ENST00000452372 PCDHGA7Q9Y5G6 932 aa19.35■□□□□ 0.69
COL9A3-202ENST00000452372 B4E171 279 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 MATN2O00339 956 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 BTN3A3O00478 584 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 VPS26AO75436 327 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 RASSF9O75901 435 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 MATN4O95460 622 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 POLR2CP19387 275 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-202ENST00000452372 CD9P21926 228 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 SHMT2P34897 504 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 TSPAN7P41732 249 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 SKIV2L2P42285 1042 aaKnown RBP19.34■□□□□ 0.69
COL9A3-202ENST00000452372 UCNP55089 124 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 C19orf57Q0VDD7 668 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 PRKAA1Q13131 559 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 CLN3Q13286 438 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 DNTTIP2Q5QJE6 756 aaKnown RBP19.34■□□□□ 0.69
COL9A3-202ENST00000452372 BROXQ5VW32 411 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 CAPN12Q6ZSI9 719 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 C3orf62Q6ZUJ4 267 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 SLC26A11Q86WA9 606 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 DCUN1D3Q8IWE4 304 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 ADGRF3Q8IZF5 1079 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 ZNF843Q8N446 348 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 GIMAP7Q8NHV1 300 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 KLHL6Q8WZ60 621 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 FOPNLQ96NB1 174 aa19.34■□□□□ 0.69
COL9A3-202ENST00000452372 NDNQ99608 321 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms