RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 GRIK2Q13002 908 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 IGSF11Q5DX21 431 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 DGLUCYQ7Z3D6 616 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 RTN4RL1Q86UN2 441 aaPredicted RBP13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 MINDY1Q8N5J2 469 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 NEDD4LQ96PU5 975 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 ACBD6Q9BR61 282 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZNF556Q9HAH1 456 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM118AQ9NWS6 357 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 FNIP2Q9P278 1114 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 TMPRSS11EQ9UL52 423 aa13.21□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM72CH0Y354 149 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 DFFAO00273 331 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 B4GALT3O60512 393 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ALPLP05186 524 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ATF6P18850 670 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 CD83Q01151 205 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 GPAT3Q53EU6 434 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM72AQ5TYM5 149 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM72DQ6L9T8 149 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 BEND5Q7L4P6 421 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAM72BQ86X60 149 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 RNF135Q8IUD6 432 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 KIAA1958Q8N8K9 716 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZFAND1Q8TCF1 268 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 C19orf60Q96EN9 201 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC30A3Q99726 388 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 C1QTNF1Q9BXJ1 281 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 C14orf119Q9NWQ9 140 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 INTS6Q9UL03 887 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 NAALAD2Q9Y3Q0 740 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 MEIOCA2RUB1 952 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 AHSGP02765 367 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 PCNAP12004 261 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLAMF1Q13291 335 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZNF267Q14586 743 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 LRRC26Q2I0M4 334 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 CTU1Q7Z7A3 348 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 LRRTM3Q86VH5 581 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 SAMD14Q8IZD0 417 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 C2CD4AQ8NCU7 369 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 GALNT11Q8NCW6 608 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 HEXDCQ8WVB3 486 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 AURKBQ96GD4 344 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 RNF145Q96MT1 663 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR12D3Q9UGF7 316 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 NUFIP1Q9UHK0 495 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 PCDHGA10Q9Y5H3 936 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 METTL15A6NJ78 407 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 PLD2O14939 933 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 XPNPEP2O43895 674 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 NCK1P16333 377 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 KRT20P35900 424 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 NFYCQ13952 458 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 CAPRIN1Q14444 709 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 MBTPS1Q14703 1052 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR10T2Q8NGX3 314 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 MCOLN3Q8TDD5 553 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 RDH12Q96NR8 316 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 KAT8Q9H7Z6 458 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 SNX7Q9UNH6 387 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 NEU3Q9UQ49 428 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 VWA8A3KMH1 1905 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 A0A0J9YYE9 177 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 I3L521 148 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 TFECO14948 347 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 NPPAP01160 153 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ITGB1P05556 798 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ELNP15502 786 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 TCF3P15923 654 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ERP29P30040 261 aaKnown RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 TAS2R39P59534 338 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 PRKCDQ05655 676 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 FAPQ12884 760 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 PYCR3Q53H96 274 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 MRNIPQ6NTE8 343 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 RETREG3Q86VR2 466 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ZBTB20Q9HC78 741 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 CYP4F12Q9HCS2 524 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 LEF1Q9UJU2 399 aaPredicted RBP13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
SYNGAP1-204ENST00000449372 ITGA2P17301 1181 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC15A1P46059 708 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 SOX9P48436 509 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 EEFSECP57772 596 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 CLCA4Q14CN2 919 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 OR4M1Q8NGD0 313 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 LINC01599Q8WXQ3 324 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 SLC7A6Q92536 515 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 MYLPFQ96A32 169 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 SMARCD1Q96GM5 515 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 CEP19Q96LK0 163 aa13.19□□□□□ -0.3
SYNGAP1-204ENST00000449372 IGSF5Q9NSI5 407 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms