RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 PHC3Q8NDX5 983 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 OR2Y1Q8NGV0 311 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 OR5K2Q8NHB8 316 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 CDKN2AIPNLQ96HQ2 116 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 DNAJC1Q96KC8 554 aaKnown RBP11.24□□□□□ -0.61
COPS7B-213ENST00000449174 MAP10Q9P2G4 905 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 ICKQ9UPZ9 632 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 ASF1AQ9Y294 204 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 B3GNT3Q9Y2A9 372 aa11.24□□□□□ -0.61
COPS7B-213ENST00000449174 A0A0J9YY10 115 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 BTNL10A8MVZ5 291 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 H3BMH7 237 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 DDX3YO15523 660 aaKnown RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 SEMA7AO75326 666 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 AP2A1O95782 977 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PTMAP06454 111 aaKnown RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 CHRM5P08912 532 aaPredicted RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PVRP15151 417 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PSMA3P25788 255 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 NAP1L1P55209 391 aaKnown RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PRKG2Q13237 762 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 MYBPC3Q14896 1274 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 KIR2DS3Q14952 304 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 DBN1Q16643 649 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 SLC5A12Q1EHB4 618 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 FAM69BQ5VUD6 431 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 UNC5AQ6ZN44 842 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 LINC00523Q86TU6 105 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 GALNT16Q8N428 558 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 CLDN19Q8N6F1 224 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 DLG3Q92796 817 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PTERQ96BW5 349 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 GBP5Q96PP8 586 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 OR2A14Q96R47 310 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 TTC1Q99614 292 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 KLHL25Q9H0H3 589 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 XKR8Q9H6D3 395 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 CASS4Q9NQ75 786 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 TXLNGQ9NUQ3 528 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 IFT80Q9P2H3 777 aaPredicted RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PLCL2Q9UPR0 1127 aa11.23□□□□□ -0.61
COPS7B-213ENST00000449174 PTRH2Q9Y3E5 179 aaKnown RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 USP9YO00507 2555 aaPredicted RBP11.23□□□□□ -0.61
COPS7B-213ENST00000449174 ERI2A8K979 691 aaKnown RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 CCL22O00626 93 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 GAS8O95995 478 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 RPN2P04844 631 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 PIM1P11309 404 aaPredicted RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 MSNP26038 577 aaKnown RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 ACADLP28330 430 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 GABRA4P48169 554 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 CDKN1CP49918 316 aaPredicted RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 SPARCL1Q14515 664 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 KYNUQ16719 465 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 SYTL3Q4VX76 610 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 PRR30Q53SZ7 412 aaPredicted RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 DNAJC21Q5F1R6 531 aaKnown RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 MLIPQ5VWP3 458 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 ZADH2Q8N4Q0 377 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 OR5AR1Q8NGP9 310 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 ELMO1Q92556 727 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 SLC22A18Q96BI1 424 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 NDC1Q9BTX1 674 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 TSSK1BQ9BXA7 367 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 ILKAPQ9H0C8 392 aaPredicted RBP11.22□□□□□ -0.61
COPS7B-213ENST00000449174 FAM60AQ9NP50 221 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 LUZP4Q9P127 313 aa11.22□□□□□ -0.61
COPS7B-213ENST00000449174 USP9XQ93008 2570 aaPredicted RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 SLC5A10A0PJK1 596 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 CCDC78A2IDD5 438 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 WIPF3A6NGB9 483 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 MROH6A6NGR9 719 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 AGPSO00116 658 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 CBX6O95503 412 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 CBSLP0DN79 551 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 CBSP35520 551 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 PPARGP37231 505 aaPredicted RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 RAB28P51157 221 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 ARSFP54793 590 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 AIMP2Q13155 320 aaKnown RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 MRPL49Q13405 166 aaKnown RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 ELOAQ14241 798 aaKnown RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 POU6F1Q14863 301 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 CYP2A13Q16696 494 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 EIF2S3LQ2VIR3 472 aaKnown RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 PLEKHN1Q494U1 663 aaPredicted RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 NKAIN1Q4KMZ8 207 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 YOD1Q5VVQ6 348 aaPredicted RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 PIANPQ8IYJ0 282 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 DNAJC22Q8N4W6 341 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 ZNF655Q8N720 491 aaPredicted RBP11.21□□□□□ -0.61
COPS7B-213ENST00000449174 UBL4BQ8N7F7 174 aa11.21□□□□□ -0.61
COPS7B-213ENST00000449174 RNF214Q8ND24 703 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms