RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 KHNYNO15037 678 aaKnown RBP13.68□□□□□ -0.22
SHMT2-203ENST00000449049 BIRC5O15392 142 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 HIST1H2AGP0C0S8 130 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-203ENST00000449049 HIST1H2ADP20671 130 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 NBL1P41271 181 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 GRB7Q14451 532 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 KIR2DS5Q14953 304 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 CCDC6Q16204 474 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 PHC3Q8NDX5 983 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 ZDHHC1Q8WTX9 485 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
SHMT2-203ENST00000449049 HIST1H2AHQ96KK5 128 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 HIST1H2AJQ99878 128 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 H2AFJQ9BTM1 129 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 IL21RQ9HBE5 538 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 INTS9Q9NV88 658 aaKnown RBP13.68□□□□□ -0.22
SHMT2-203ENST00000449049 OXSMQ9NWU1 459 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 DOLKQ9UPQ8 538 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 USP34Q70CQ2 3546 aa13.68□□□□□ -0.22
SHMT2-203ENST00000449049 ADAMTS9Q9P2N4 1935 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 NEMP2A6NFY4 417 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 DLL1O00548 723 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 ANXA6P08133 673 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 GIMD1P0DJR0 217 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 XRCC1P18887 633 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 IL9RQ01113 521 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 OGFOD3Q6PK18 319 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SLC22A9Q8IVM8 553 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SAP25Q8TEE9 199 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 RAD51AP1Q96B01 352 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 CCDC126Q96EE4 140 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 CCDC138Q96M89 665 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 FERD3LQ96RJ6 166 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 PKP4Q99569 1192 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 MECRQ9BV79 373 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 POT1Q9NUX5 634 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 ARL15Q9NXU5 204 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 CD274Q9NZQ7 290 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 NCF1BA6NI72 391 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 NCF1CA8MVU1 366 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 B4DGG1 531 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 IPO13O94829 963 aaKnown RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 S100BP04271 92 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 ANXA5P08758 320 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 GFAPP14136 432 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 NCF1P14598 390 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 ENGP17813 658 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 KCNA4P22459 653 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 NDUFS1P28331 727 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SLC19A1P41440 591 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 CCT8P50990 548 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 UBE2IP63279 158 aaKnown RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SETDB1Q15047 1291 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 DEFB133Q30KQ1 61 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SULT1C3Q6IMI6 304 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 TCEAL6Q6IPX3 200 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 TTC23LQ6PF05 361 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 MBOAT1Q6ZNC8 495 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 C17orf82Q86X59 251 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 C10orf107Q8IVU9 208 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SFTPA2Q8IWL1 248 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 TCAIMQ8N3R3 496 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 OR9A1PQ8NGU1 263 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 PATE1Q8WXA2 126 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 TCEAL3Q969E4 200 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 RHBDF1Q96CC6 855 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 CXorf40BQ96DE9 158 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 PAIP2Q9BPZ3 127 aaKnown RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 SIRPGQ9P1W8 387 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 PTBP2Q9UKA9 531 aaKnown RBP13.67□□□□□ -0.22
SHMT2-203ENST00000449049 GMEB2Q9UKD1 530 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 COLEC10Q9Y6Z7 277 aa13.67□□□□□ -0.22
SHMT2-203ENST00000449049 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 STX16-NPEPL1H3BU86 382 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 STX16O14662 325 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 CLGNO14967 610 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 NOBOXO60393 691 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 GUCA1CO95843 209 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 HNMTP50135 292 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 PRKAA2P54646 552 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 DNAJB13P59910 316 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 PFKFB4Q16877 469 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 C6orf132Q5T0Z8 1188 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 LIPMQ5VYY2 423 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 PTGR2Q8N8N7 351 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-203ENST00000449049 SLC37A2Q8TED4 501 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 UBTD2Q8WUN7 234 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 ZFPM2Q8WW38 1151 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 FBXL8Q96CD0 374 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 CAMK1GQ96NX5 476 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 EGFL8Q99944 293 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 HGH1Q9BTY7 390 aa13.66□□□□□ -0.22
SHMT2-203ENST00000449049 MENTQ9BUN1 341 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms