RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GYPCP04921 128 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF806P0C7X5 589 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 DMTNQ08495 405 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 CCDC142Q17RM4 750 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FAM69BQ5VUD6 431 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 NIPAL1Q6NVV3 410 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 HIBCHQ6NVY1 386 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMEM184AQ6ZMB5 413 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SPRED2Q7Z698 418 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPSM1Q86YR5 675 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 UBQLNLQ8IYU4 475 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 CADM4Q8NFZ8 388 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCDH19Q8TAB3 1148 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATG4AQ8WYN0 398 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SMPDL3AQ92484 453 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 TUBGCP3Q96CW5 907 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 C6orf106Q9H6K1 298 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 RRAGDQ9NQL2 400 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ITM2CQ9NQX7 267 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZMIZ1Q9ULJ6 1067 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 STK38LQ9Y2H1 464 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 LIN7AO14910 233 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 CD3EAPO15446 510 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZIC2O95409 532 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLCO1A2P46721 670 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 MMRN1Q13201 1228 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 GPRIN1Q7Z2K8 1008 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SNX20Q7Z614 316 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMPRSS12Q86WS5 348 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 UNC5BQ8IZJ1 945 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC30A2Q9BRI3 323 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 MRPL40Q9NQ50 206 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 VPS18Q9P253 973 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 HS3ST3A1Q9Y663 406 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 NBASA2RRP1 2371 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 DNAJB1P25685 340 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 NFATC4Q14934 902 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 NR6A1Q15406 480 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SCARA3Q6AZY7 606 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 KRT74Q7RTS7 529 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 IL17RCQ8NAC3 791 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ART5Q96L15 291 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PTGES2Q9H7Z7 377 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 NOD2Q9HC29 1040 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PIH1D1Q9NWS0 290 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 GALNT8Q9NY28 637 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 PPARGC1AQ9UBK2 798 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 FAM32AQ9Y421 112 aaKnown RBP5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 SNX11Q9Y5W9 270 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF831Q5JPB2 1677 aa5.52□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMEM114B3SHH9 223 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 LRP3O75074 770 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ERAL1O75616 437 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 MYL2P10916 166 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 GKP32189 559 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 PRIM2P49643 509 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 CYP4F2P78329 520 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 GRM7Q14831 915 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 C3orf62Q6ZUJ4 267 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRIM74Q86UV6 250 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 CHST14Q8NCH0 376 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 RCBTB1Q8NDN9 531 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 MRGPRX1Q96LB2 322 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TRMOQ9BU70 441 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 FKBPLQ9UIM3 349 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCDHGB6Q9Y5F9 930 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 PCDHGB5Q9Y5G0 923 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 USP1O94782 785 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 CLDN7O95471 211 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ATP5A1P25705 553 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 PPP2R1BP30154 601 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 HLA-FP30511 346 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ACSL1P33121 698 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TMEM211Q6ICI0 200 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZNF687Q8N1G0 1237 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TM9SF3Q9HD45 589 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ZDHHC3Q9NYG2 299 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 SBF1O95248 1867 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ANKRD66B4E2M5 251 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 SLC28A1O00337 649 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 CCL21O00585 134 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 B3GALT2O43825 422 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 RAD1O60671 282 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 MTX2O75431 263 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 SNRPAP09012 282 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ETV3P41162 512 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 UBE2NP61088 152 aaKnown RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 FCHO2Q0JRZ9 810 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 ITIH4Q14624 930 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TAF1AQ15573 450 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 N4BP2L1Q5TBK1 243 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 TTLL10Q6ZVT0 673 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 EFHD2Q96C19 240 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 PSKH2Q96QS6 385 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 MKKSQ9NPJ1 570 aaPredicted RBP5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 KLHL28Q9NXS3 571 aa5.51□□□□□ -1.53
CDC42BPA-209ENST00000448940 STX18Q9P2W9 335 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms