RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 CYHR1Q6ZMK1 362 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 KIAA0408Q6ZU52 694 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 TRIM73Q86UV7 250 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 TAX1BP1Q86VP1 789 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 OOSP2Q86WS3 158 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 CTAGE3PQ8IX95 158 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 FAM20CQ8IXL6 584 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 CPNE9Q8IYJ1 553 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 ADGRF3Q8IZF5 1079 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 CD200R1Q8TD46 325 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 FBF1Q8TES7 1133 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 KCNJ9Q92806 393 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 PMEPA1Q969W9 287 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 ELMO2Q96JJ3 720 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 OLFM1Q99784 485 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 SLC39A1Q9NY26 324 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 EPHA6Q9UF33 1036 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 POLG2Q9UHN1 485 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 TRMT6Q9UJA5 497 aaKnown RBP12.97□□□□□ -0.33
SNHG4-201ENST00000448190 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 ZZEF1O43149 2961 aa12.97□□□□□ -0.33
SNHG4-201ENST00000448190 KNTC1P50748 2209 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 MN1Q10571 1320 aaPredicted RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 SLC9B1P1A6NJY1 282 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 ESPNB1AK53 854 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 C1orf105O95561 183 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 PRDX3P30048 256 aaKnown RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 SLC5A2P31639 672 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 FOXM1Q08050 763 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 PRKAA1Q13131 559 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 EIF3IQ13347 325 aaKnown RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 GRB7Q14451 532 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 GBX1Q14549 363 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 TTLL9Q3SXZ7 439 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 TTC23LQ6PF05 361 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 UNC5DQ6UXZ4 953 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 PIWIL4Q7Z3Z4 852 aaKnown RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 PPM1NQ8N819 430 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 KDF1Q8NAX2 398 aaPredicted RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 UHMK1Q8TAS1 419 aaKnown RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 FOPNLQ96NB1 174 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 L2HGDHQ9H9P8 463 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 APMAPQ9HDC9 416 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 ASCL3Q9NQ33 180 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 TAS2R13Q9NYV9 303 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 ACTR10Q9NZ32 417 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 NINJ2Q9NZG7 142 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 MTRF1LQ9UGC7 380 aaKnown RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 SLC39A10Q9ULF5 831 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 ZMIZ1Q9ULJ6 1067 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 MTO1Q9Y2Z2 717 aaKnown RBP12.96□□□□□ -0.33
SNHG4-201ENST00000448190 PCDHGA8Q9Y5G5 932 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 COMMD10Q9Y6G5 202 aa12.96□□□□□ -0.33
SNHG4-201ENST00000448190 CELSR3Q9NYQ7 3312 aa12.96□□□□□ -0.34
SNHG4-201ENST00000448190 FAM159BA6NKW6 160 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ISM1B1AKI9 464 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 C9orf172C9J069 976 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
SNHG4-201ENST00000448190 MATN4O95460 622 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 C1QAP02745 245 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 RPN2P04844 631 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 CHRM5P08912 532 aaPredicted RBP12.95□□□□□ -0.34
SNHG4-201ENST00000448190 PVRP15151 417 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 CDH3P22223 829 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ECHS1P30084 290 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 SKIV2L2P42285 1042 aaKnown RBP12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ARL4DP49703 201 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 COL9A2Q14055 689 aaPredicted RBP12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ZNF460Q14592 562 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 EFTUD2Q15029 972 aaKnown RBP eCLIP12.95□□□□□ -0.341e-9■■■■■ 35.4
SNHG4-201ENST00000448190 ST3GAL2Q16842 350 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 KBTBD12Q3ZCT8 623 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 TEX35Q5T0J7 233 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ANKS6Q68DC2 871 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ZC3HC1Q86WB0 502 aaKnown RBP12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ZFAND4Q86XD8 727 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 IFT20Q8IY31 132 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 LSMEM2Q8N112 164 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 LINC01555Q8NAE3 123 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 FGF11Q92914 225 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 RAB33BQ9H082 229 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 FOXJ2Q9P0K8 574 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 KLHL20Q9Y2M5 609 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 B3GALT1Q9Y5Z6 326 aa12.95□□□□□ -0.34
SNHG4-201ENST00000448190 ZNF106Q9H2Y7 1883 aaKnown RBP12.95□□□□□ -0.34
SNHG4-201ENST00000448190 PIPSLA2A3N6 862 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 ARHGEF33A8MVX0 844 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 C2orf74A8MZ97 194 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 ACSL3O95573 720 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 SYF2O95926 243 aaKnown RBP12.94□□□□□ -0.34
SNHG4-201ENST00000448190 ITGA2BP08514 1039 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 GSTA2P09210 222 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 FOLR1P15328 257 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 UGT2B7P16662 529 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 FDXRP22570 491 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 SHMT2P34897 504 aa12.94□□□□□ -0.34
SNHG4-201ENST00000448190 DEKP35659 375 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms