RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 AGTRAPQ6RW13 159 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TSPAN33Q86UF1 283 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ANKRD46Q86W74 232 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PROSER1Q86XN7 944 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 GATAD2AQ86YP4 633 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 MICU2Q8IYU8 434 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TERB1Q8NA31 727 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TTC29Q8NA56 475 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ADAMTS15Q8TE58 950 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 NACC2Q96BF6 587 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 THAP11Q96EK4 314 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SLC39A13Q96H72 371 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 EXD2Q9NVH0 621 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SUFUQ9UMX1 484 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SLC9A8Q9Y2E8 581 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 NPC1O15118 1278 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 MID1O15344 667 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TGFB1P01137 390 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SERPINB10P48595 397 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 RALGDSQ12967 914 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SHHQ15465 462 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 REP15Q6BDI9 236 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 NRSN1Q8IZ57 195 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 XAGE5Q8WWM1 108 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 MAGEL2Q9UJ55 1249 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 GMEB2Q9UKD1 530 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 COPG1Q9Y678 874 aaKnown RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 LOC730098B7Z3J9 87 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 HHLA1C9JL84 531 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 C6P13671 934 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PCSK2P16519 638 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ITGA2P17301 1181 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 C5AR1P21730 350 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CTSOP43234 321 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 BNIP1Q12981 228 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TOMM20Q15388 145 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TRIM71Q2Q1W2 868 aaKnown RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ACSBG2Q5FVE4 666 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 FRG2Q64ET8 278 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 STEAP4Q687X5 459 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ZNF852Q6ZMS4 543 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PIGWQ7Z7B1 504 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 DCUN1D3Q8IWE4 304 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TTLQ8NG68 377 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 LMX1AQ8TE12 382 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SCRN2Q96FV2 425 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 FRG2BQ96QU4 278 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ZDHHC2Q9UIJ5 367 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 QSER1Q2KHR3 1735 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SMCHD1A6NHR9 2005 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 A0A0G2JN53 185 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CPED1A4D0V7 1026 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 TMEM233B4DJY2 109 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SUV39H1O43463 412 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ABLIM3O94929 683 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 AQP1P29972 269 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SPINT3P49223 89 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ERVK-8P63133 956 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CYP4F3Q08477 520 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SP140Q13342 867 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 FAM174BQ3ZCQ3 159 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 WDR45BQ5MNZ6 344 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 GOLGA7Q7Z5G4 137 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ADCK1Q86TW2 530 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PGAM4Q8N0Y7 254 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 OR4E2Q8NGC2 313 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 MAGEE2Q8TD90 523 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 LINC01599Q8WXQ3 324 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 FAM3CQ92520 227 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 APOL4Q9BPW4 351 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 GPR174Q9BXC1 333 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CXXC1Q9P0U4 656 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 VPS29Q9UBQ0 182 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ADGRE2Q9UHX3 823 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 MYO7AQ13402 2215 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PLK4O00444 970 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 LILRB3O75022 631 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CXCL10P02778 98 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ALDOAP04075 364 aaKnown RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 BPIP17213 487 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 EFNA1P20827 205 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PRDX6P30041 224 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ECHS1P30084 290 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 ARRB1P49407 418 aaPredicted RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CLK3P49761 638 aaKnown RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 FOXM1Q08050 763 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 PCLAFQ15004 111 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 C16orf87Q6PH81 154 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SPESP1Q6UW49 350 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 RINLQ6ZS11 566 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 CYS1Q717R9 158 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 HPS6Q86YV9 775 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 OR4F6Q8NGB9 312 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 OR9A1PQ8NGU1 263 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 C10orf82Q8WW14 230 aa7.25□□□□□ -1.25
SYNE1-213ENST00000448038 RC3H2Q9HBD1 1191 aaKnown RBP7.25□□□□□ -1.25
SYNE1-213ENST00000448038 SDK1Q7Z5N4 2213 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 PCDH7O60245 1069 aa7.24□□□□□ -1.25
SYNE1-213ENST00000448038 CST1P01037 141 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms