RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SIRPGQ9P1W8 387 aa19.02■□□□□ 0.64
SGCE-207ENST00000447873 HEBP2Q9Y5Z4 205 aa19.02■□□□□ 0.64
SGCE-207ENST00000447873 VPS13AQ96RL7 3174 aa19.02■□□□□ 0.64
SGCE-207ENST00000447873 A6NCN8 305 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 AQP9O43315 295 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 SDC3O75056 442 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 EPN2O95208 641 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 MTHFD1P11586 935 aaKnown RBP19.02■□□□□ 0.63
SGCE-207ENST00000447873 SLC2A4P14672 509 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 BGNP21810 368 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 DNAJB13P59910 316 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 GRIK2Q13002 908 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 CCSMST1Q4G0I0 132 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 SULT1C3Q6IMI6 304 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 DUS1LQ6P1R4 473 aaKnown RBP19.02■□□□□ 0.63
SGCE-207ENST00000447873 SLC23A3Q6PIS1 610 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 TBC1D21Q8IYX1 336 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 SDR16C5Q8N3Y7 309 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 LRRC8CQ8TDW0 803 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 RAD51AP1Q96B01 352 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 RHBDF1Q96CC6 855 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 CCDC138Q96M89 665 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 MANSC1Q9H8J5 431 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 CAPN10Q9HC96 672 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 SLC6A14Q9UN76 642 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 TDRKHQ9Y2W6 561 aaKnown RBP19.02■□□□□ 0.63
SGCE-207ENST00000447873 PCDHGA5Q9Y5G8 931 aa19.02■□□□□ 0.63
SGCE-207ENST00000447873 ADAMTS9Q9P2N4 1935 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 OR5K4A6NMS3 321 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 PATE3B3GLJ2 98 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 STX16-NPEPL1H3BU86 382 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 STX16O14662 325 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 FGF3P11487 239 aaPredicted RBP19.01■□□□□ 0.63
SGCE-207ENST00000447873 MPLP40238 635 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 RXRGP48443 463 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 HNMTP50135 292 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 NAGLUP54802 743 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 PRKG2Q13237 762 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 SETDB1Q15047 1291 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 IYDQ6PHW0 289 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 TCAIMQ8N3R3 496 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 CXorf40BQ96DE9 158 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 CAPS2Q9BXY5 557 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 ARRDC1-AS1Q9H2J1 176 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 MVB12BQ9H7P6 319 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 FSCN3Q9NQT6 498 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 WWOXQ9NZC7 414 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 CIDEBQ9UHD4 219 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 ADAM21Q9UKJ8 722 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 COLEC10Q9Y6Z7 277 aa19.01■□□□□ 0.63
SGCE-207ENST00000447873 CACNA1HO95180 2353 aa19■□□□□ 0.63
SGCE-207ENST00000447873 TRBV23OR9-2A0A075B6M9 112 aa19■□□□□ 0.63
SGCE-207ENST00000447873 KRT87PA6NCN2 255 aa19■□□□□ 0.63
SGCE-207ENST00000447873 LMO7DNF2Z398 122 aa19■□□□□ 0.63
SGCE-207ENST00000447873 MYO1CO00159 1063 aa19■□□□□ 0.63
SGCE-207ENST00000447873 YY2O15391 372 aa19■□□□□ 0.63
SGCE-207ENST00000447873 IMPDH1P20839 514 aa19■□□□□ 0.63
SGCE-207ENST00000447873 HERVK_113P63132 956 aa19■□□□□ 0.63
SGCE-207ENST00000447873 HLA-BQ31612 363 aa19■□□□□ 0.63
SGCE-207ENST00000447873 FBXO48Q5FWF7 155 aa19■□□□□ 0.63
SGCE-207ENST00000447873 CFAP157Q5JU67 520 aa19■□□□□ 0.63
SGCE-207ENST00000447873 IL27RAQ6UWB1 636 aa19■□□□□ 0.63
SGCE-207ENST00000447873 ZCCHC23Q6ZST2 131 aa19■□□□□ 0.63
SGCE-207ENST00000447873 CCNYL1Q8N7R7 359 aa19■□□□□ 0.63
SGCE-207ENST00000447873 OR9A1PQ8NGU1 263 aa19■□□□□ 0.63
SGCE-207ENST00000447873 RAB3IL1Q8TBN0 382 aa19■□□□□ 0.63
SGCE-207ENST00000447873 ZDHHC1Q8WTX9 485 aa19■□□□□ 0.63
SGCE-207ENST00000447873 ATL1Q8WXF7 558 aa19■□□□□ 0.63
SGCE-207ENST00000447873 ZNF75CPQ92670 426 aaPredicted RBP19■□□□□ 0.63
SGCE-207ENST00000447873 TMEM237Q96Q45 408 aa19■□□□□ 0.63
SGCE-207ENST00000447873 PKP4Q99569 1192 aa19■□□□□ 0.63
SGCE-207ENST00000447873 HGH1Q9BTY7 390 aa19■□□□□ 0.63
SGCE-207ENST00000447873 ERVK-6Q9BXR3 956 aa19■□□□□ 0.63
SGCE-207ENST00000447873 ZNF624Q9P2J8 865 aaPredicted RBP19■□□□□ 0.63
SGCE-207ENST00000447873 POLG2Q9UHN1 485 aa19■□□□□ 0.63
SGCE-207ENST00000447873 PTBP2Q9UKA9 531 aaKnown RBP19■□□□□ 0.63
SGCE-207ENST00000447873 LAMA1P25391 3075 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 DMDP11532 3685 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 DFNA5O60443 496 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 H2AFYO75367 372 aaKnown RBP18.99■□□□□ 0.63
SGCE-207ENST00000447873 SIX3O95343 332 aaPredicted RBP18.99■□□□□ 0.63
SGCE-207ENST00000447873 SERPINE1P05121 402 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 ANXA6P08133 673 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 GRK2P25098 689 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 NDUFS1P28331 727 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 EEF1DP29692 281 aaKnown RBP18.99■□□□□ 0.63
SGCE-207ENST00000447873 ZNF423Q2M1K9 1284 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 ATG16L1Q676U5 607 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 TRIM48Q8IWZ4 208 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 GATA5Q9BWX5 397 aaPredicted RBP18.99■□□□□ 0.63
SGCE-207ENST00000447873 UCKL1Q9NWZ5 548 aa18.99■□□□□ 0.63
SGCE-207ENST00000447873 TNPO3Q9Y5L0 923 aaKnown RBP18.99■□□□□ 0.63
SGCE-207ENST00000447873 KIR2DS5A0A0G2JLQ3 304 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 A0A0G2JNG1 304 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 A0A1B0GTQ1 180 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 B4DGG1 531 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 KIR2DS3K7RE56 304 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 SUPT7LO94864 414 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 SLC16A8O95907 504 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 SYPP08247 313 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms