RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 LZTR1Q8N653 840 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SGMS2Q8NHU3 365 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SEMA4DQ92854 862 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 DTD2Q96FN9 168 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 COX14Q96I36 57 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 THOC3Q96J01 351 aaKnown RBP3.14□□□□□ -1.91
PMS1-215ENST00000447232 DHRS1Q96LJ7 313 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 C1orf74Q96LT6 269 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 JMJD8Q96S16 334 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 CD180Q99467 661 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SARGQ9BW04 601 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 LRTM1Q9HBL6 345 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SLC40A1Q9NP59 571 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 TNFRSF12AQ9NP84 129 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 LHX3Q9UBR4 397 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 KCNK6Q9Y257 313 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 MPDZO75970 2070 aa3.14□□□□□ -1.91
PMS1-215ENST00000447232 SYNJ2BP-COX16A0A087WUM0 186 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 ASPDHA6ND91 283 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 NUDT19A8MXV4 375 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 M0QYV0 167 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 MAPK13O15264 365 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 TLX2O43763 284 aaPredicted RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 ZBTB11O95625 1053 aaPredicted RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 CNOT4O95628 575 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 ENDOUP21128 410 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 AGXTP21549 392 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 ETFBP38117 255 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 GPD2P43304 727 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 GCLMP48507 274 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CDK17Q00537 523 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 ADCY2Q08462 1091 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 GPR18Q14330 331 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CAPRIN1Q14444 709 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 CNGA2Q16280 664 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 FLYWCH1Q4VC44 716 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 INO80DQ53TQ3 878 aaPredicted RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 TMEM211Q6ICI0 200 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 KIRREL2Q6UWL6 708 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 LEKR1Q6ZMV7 388 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 USP45Q70EL2 814 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CHST15Q7LFX5 561 aaPredicted RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 TRIM74Q86UV6 250 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CAMK1DQ8IU85 385 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 TMTC1Q8IUR5 882 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CCDC71Q8IV32 467 aaPredicted RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 OR1L3Q8NH93 324 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 FAM222BQ8WU58 562 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CASKIN2Q8WXE0 1202 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 RND1Q92730 232 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SNX21Q969T3 373 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 TMEM125Q96AQ2 219 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SEC16BQ96JE7 1060 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 THAP9Q9H5L6 903 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 NOL6Q9H6R4 1146 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 POT1Q9NUX5 634 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SEPT11Q9NVA2 429 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 GPATCH2LQ9NWQ4 482 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 COX16Q9P0S2 106 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 PRKAB1Q9Y478 270 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 HS3ST3B1Q9Y662 390 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 A0A1W2PPR1 153 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 ASNA1O43681 348 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SNX2O60749 519 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SMPD2O60906 423 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SOX30O94993 753 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 MLYCDO95822 493 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 VIPP01282 170 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 GSNP06396 782 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 PAEPP09466 180 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CBSLP0DN79 551 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 ACP5P13686 325 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CBSP35520 551 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 PEX19P40855 299 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 RHOAP61586 193 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 HSF1Q00613 529 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SRSF2Q01130 221 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 MVKQ03426 396 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 OLIG2Q13516 323 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 SNTB1Q13884 538 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 CNGA3Q16281 694 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 KNOP1Q1ED39 458 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 ANKRD39Q53RE8 183 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 BRMS1LQ5PSV4 323 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 ACBD5Q5T8D3 534 aaPredicted RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 MLIPQ5VWP3 458 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 RRAGBQ5VZM2 374 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 RAET1GQ6H3X3 334 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 FBXO38Q6PIJ6 1188 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 LRRC31Q6UY01 552 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 TMEM110Q86TL2 294 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 DNAAF5Q86Y56 855 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 RBM12BQ8IXT5 1001 aaKnown RBP3.13□□□□□ -1.91
PMS1-215ENST00000447232 DRC7Q8IY82 874 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 DEFB106AQ8N104 65 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CARFQ8N187 725 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 GHDCQ8N2G8 530 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 AOPEPQ8N6M6 819 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 NETO2Q8NC67 525 aa3.13□□□□□ -1.91
PMS1-215ENST00000447232 CCDC150Q8NCX0 1101 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms