RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 MVB12BQ9H7P6 319 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 UTP6Q9NYH9 597 aaKnown RBP17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 TMEM216Q9P0N5 145 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 PDE10AQ9Y233 779 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 U3KQA8 63 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 GVINP1Q7Z2Y8 2422 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 PCNX2A6NKB5 2137 aa17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 COL5A1P20908 1838 aaPredicted RBP17.51■□□□□ 0.39
TRAPPC4-203ENST00000447216 PPM1DO15297 605 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 FLRT2O43155 660 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 SH3BP5O60239 455 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 GFRA3O60609 400 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 GLRA3O75311 464 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 SYF2O95926 243 aaKnown RBP17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 TPBGLP0DKB5 382 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 CYP2A7P20853 494 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 GRK6P43250 576 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 MAGOHP61326 146 aaKnown RBP17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 SP140Q13342 867 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 ACAP2Q15057 778 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 NR0B2Q15466 257 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 TSNAXIP1Q2TAA8 658 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 INAVAQ3KP66 663 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 TECRLQ5HYJ1 363 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 N4BP2L1Q5TBK1 243 aaPredicted RBP17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 KLC3Q6P597 504 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 DBX2Q6ZNG2 339 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 ADAMTSL2Q86TH1 951 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 DCUN1D3Q8IWE4 304 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 LMNTD1Q8N9Z9 388 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 RHBDD1Q8TEB9 315 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 APOPT1Q96IL0 206 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 SLC12A9Q9BXP2 914 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 TFB2MQ9H5Q4 396 aaKnown RBP17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 PARVBQ9HBI1 364 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 POT1Q9NUX5 634 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 SENP1Q9P0U3 644 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 EMCNQ9ULC0 261 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 RNF112Q9ULX5 631 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 PADI4Q9UM07 663 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 RNF215Q9Y6U7 377 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 COLEC10Q9Y6Z7 277 aa17.5■□□□□ 0.39
TRAPPC4-203ENST00000447216 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 SLC16A5O15375 505 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 FOXD2O60548 495 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 RPN2P04844 631 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 GSTA1P08263 222 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 MAP4P27816 1152 aaKnown RBP17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 CRHR1P34998 444 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 MAPK9P45984 424 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 SLC14A1Q13336 389 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 BIRC2Q13490 618 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 GPR18Q14330 331 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 GRB7Q14451 532 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 PPP1R3AQ16821 1122 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 PROX2Q3B8N5 592 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 FRA10AC1Q70Z53 315 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 GPSM1Q86YR5 675 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 NAXDQ8IW45 347 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 KIAA2013Q8IYS2 634 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 FAM181AQ8N9Y4 354 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 MCOLN3Q8TDD5 553 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 ATP6V1G3Q96LB4 118 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 IL17FQ96PD4 163 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 ATOH8Q96SQ7 321 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 PKP4Q99569 1192 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 XKR8Q9H6D3 395 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 KIR3DX1Q9H7L2 352 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 SLC40A1Q9NP59 571 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 MKS1Q9NXB0 559 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 XPR1Q9UBH6 696 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 DCDC2Q9UHG0 476 aa17.49■□□□□ 0.39
TRAPPC4-203ENST00000447216 CPED1A4D0V7 1026 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 NCF1BA6NI72 391 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 RHPN2P1A8MT19 583 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 NCF1CA8MVU1 366 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 SUPT3HB4E1H0 165 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 UBXN8O00124 270 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 TK2O00142 265 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 ATP8B1O43520 1251 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 KERAO60938 352 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 SUPT3HO75486 399 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 GUCA1CO95843 209 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 NCF1P14598 390 aaPredicted RBP17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 NDUFS1P28331 727 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 FASLGP48023 281 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 CCT5P48643 541 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 RPIAP49247 311 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 GUSBP11Q6P575 273 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 TTC23LQ6PF05 361 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 TMEM26Q6ZUK4 368 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 OR52E1Q8NGJ3 308 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 OR9A1PQ8NGU1 263 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 STAG3L4Q8TBR4 150 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 CNDP2Q96KP4 475 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 TBC1D10AQ9BXI6 508 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 STN1Q9H668 368 aaKnown RBP17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 KCNK9Q9NPC2 374 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 CPSF2Q9P2I0 782 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms