RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 ZNF181Q2M3W8 571 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 TREML2Q5T2D2 321 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 COL21A1Q96P44 957 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 TREM1Q9NP99 234 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 RNF19AQ9NV58 838 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 PCDHB9Q9Y5E1 797 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 ZSCAN5BA6NJL1 495 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 PLD2O14939 933 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 PAGE1O75459 146 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 HDCP19113 662 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 RAB39AQ14964 217 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 TSTD2Q5T7W7 516 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 EIF5AL1Q6IS14 154 aaKnown RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 FBXL19Q6PCT2 694 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 KLHL35Q6PF15 583 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 CYP4V2Q6ZWL3 525 aaPredicted RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 SUSD6Q92537 303 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF696Q9H7X3 374 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 URADA6NGE7 173 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 WRBO00258 174 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 OR10H2O60403 315 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 MSL3P1P0C860 447 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 CD52P31358 61 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 GSK3BP49841 420 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 FNDC3BQ53EP0 1204 aaKnown RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 C9orf64Q5T6V5 341 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 LDB1Q86U70 411 aaPredicted RBP18.3■□□□□ 0.52
SHANK3-203ENST00000445220 ZBTB2Q8N680 514 aa18.3■□□□□ 0.52
SHANK3-203ENST00000445220 IL7RP16871 459 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 CD247P20963 164 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 DPY19L1Q2PZI1 675 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ALG11Q2TAA5 492 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 HSDL1Q3SXM5 330 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ADGRG2Q8IZP9 1017 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 CHST4Q8NCG5 386 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 SPPL2BQ8TCT7 592 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 POLR2J3Q9H1A7 115 aaKnown RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ATPIF1Q9UII2 106 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 MAFBQ9Y5Q3 323 aaPredicted RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 NDST3O95803 873 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 TSTQ16762 297 aaKnown RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 FBXO48Q5FWF7 155 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF311Q5JNZ3 666 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 HBEGFQ99075 208 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ZBTB26Q9HCK0 441 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 CHMP1AQ9HD42 196 aaPredicted RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 EIF2B4Q9UI10 523 aaKnown RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 DLGAP1O14490 977 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ACSL4O60488 711 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 IMPDH1P20839 514 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 LARS2Q15031 903 aaKnown RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 SPATS1Q496A3 300 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 QSOX2Q6ZRP7 698 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 MSANTD3Q96H12 275 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 TMEM27Q9HBJ8 222 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF358Q9NW07 568 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF214Q9UL59 606 aaPredicted RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 MED1Q15648 1581 aaPredicted RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 FXYD6-FXYD2A0A087WZ82 144 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 A0A0J9YVX5 310 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 GJB1P08034 283 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 OR2T5Q6IEZ7 315 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 RD3Q7Z3Z2 195 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 JAZF1Q86VZ6 243 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 ATCAYQ86WG3 371 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 OR2T29Q8NH02 315 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 FXYD6Q9H0Q3 95 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 RPF2Q9H7B2 306 aaKnown RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 MEMO1Q9Y316 297 aa18.29■□□□□ 0.52
SHANK3-203ENST00000445220 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
SHANK3-203ENST00000445220 DCLK1O15075 740 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 PAPSS2O95340 614 aaPredicted RBP18.28■□□□□ 0.52
SHANK3-203ENST00000445220 MMP3P08254 477 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 LAMP2P13473 410 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 SSR2P43308 183 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 MEP1AQ16819 746 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 C4orf46Q504U0 113 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 EMC10Q5UCC4 262 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 RAB12Q6IQ22 244 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 FATE1Q969F0 183 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 CREB3L1Q96BA8 519 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 CGREF1Q99674 301 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 ASAH2Q9NR71 780 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF639Q9UID6 485 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 RBM7Q9Y580 266 aaKnown RBP18.28■□□□□ 0.52
SHANK3-203ENST00000445220 M0R233 179 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 IRF9Q00978 393 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 KLHL36Q8N4N3 616 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 OR10H4Q8NGA5 316 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 LPPQ93052 612 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 ZNF641Q96N77 438 aaPredicted RBP18.28■□□□□ 0.52
SHANK3-203ENST00000445220 TMEM209Q96SK2 561 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 CD93Q9NPY3 652 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 MTMR10Q9NXD2 777 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 POFUT2Q9Y2G5 429 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 FAM159BA6NKW6 160 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 CPSF4LA6NMK7 179 aaKnown RBP18.28■□□□□ 0.52
SHANK3-203ENST00000445220 SLC7A4O43246 635 aa18.28■□□□□ 0.52
SHANK3-203ENST00000445220 MYCLP1P12525 358 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms