RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 C1orf105O95561 183 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 SYF2O95926 243 aaKnown RBP13.7□□□□□ -0.22
SSBP3-208ENST00000444533 ABHD2P08910 425 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 JMJD7P0C870 316 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 CNTFP26441 200 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 HSD17B2P37059 387 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 RAB28P51157 221 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 SHC2P98077 582 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 SP140Q13342 867 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 GBX1Q14549 363 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 PAQR3Q6TCH7 311 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 XKR5Q6UX68 686 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 CCNI2Q6ZMN8 369 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-208ENST00000444533 CCDC91Q7Z6B0 441 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 AGBL5Q8NDL9 886 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 JPH3Q8WXH2 748 aaPredicted RBP13.7□□□□□ -0.22
SSBP3-208ENST00000444533 GPR22Q99680 433 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 RAB33BQ9H082 229 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 ANKZF1Q9H8Y5 726 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 SMYD2Q9NRG4 433 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 GALPQ9UBC7 116 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 EPHA6Q9UF33 1036 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 MSRB2Q9Y3D2 182 aa13.7□□□□□ -0.22
SSBP3-208ENST00000444533 RP1P56715 2156 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 CCDC187A0A096LP49 1063 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 IGHV5-10-1A0A0J9YXX1 117 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 PIPSLA2A3N6 862 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 POC1B-GALNT4F8VUJ3 575 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 SLC16A5O15375 505 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 RIPK2O43353 540 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 ITGA2BP08514 1039 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 FAM153BP0C7A2 387 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 POLR2CP19387 275 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 CRABP2P29373 138 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 FAM153CQ494X1 144 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 TAF1BQ53T94 588 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 CACHD1Q5VU97 1274 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 WDR93Q6P2C0 686 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 UBE2R2Q712K3 238 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 TBC1D1Q86TI0 1168 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 GSPT2Q8IYD1 628 aaKnown RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 LSMEM2Q8N112 164 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 CARFQ8N187 725 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 GIMAP7Q8NHV1 300 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 WDR36Q8NI36 951 aaKnown RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 UHMK1Q8TAS1 419 aaKnown RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 EEF1AKMT1Q8WVE0 214 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 RSC1A1Q92681 617 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 NXPE2Q96DL1 559 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 LIN37Q96GY3 246 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 CCDC74BQ96LY2 380 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 SLC30A3Q99726 388 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 FUT8Q9BYC5 575 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 SPATA7Q9P0W8 599 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 TLK1Q9UKI8 766 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 KLK13Q9UKR3 277 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 MTO1Q9Y2Z2 717 aaKnown RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 NFS1Q9Y697 457 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 AK5Q9Y6K8 562 aa13.69□□□□□ -0.22
SSBP3-208ENST00000444533 V9GYY5 206 aaPredicted RBP13.69□□□□□ -0.22
SSBP3-208ENST00000444533 ASXL3Q9C0F0 2248 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 MN1Q10571 1320 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 MED19A0JLT2 244 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 A8MU76 341 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 ISM1B1AKI9 464 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 RASGRF2O14827 1237 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 PSIP1O75475 530 aaKnown RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 KRT37O76014 449 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 THRAP10827 490 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 ZNF37AP17032 561 aaPredicted RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 CDH3P22223 829 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 MPSTP25325 297 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 RBMS1P29558 406 aaKnown RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 CSF2RBP32927 897 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 BDKRB1P46663 353 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 CLDN6P56747 220 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 TAS2R39P59534 338 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 RAB10P61026 200 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 ZFP36L1Q07352 338 aaKnown RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 KIR2DS3Q14952 304 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 EFTUD2Q15029 972 aaKnown RBP eCLIP13.68□□□□□ -0.221e-7■■■■■ 42.1
SSBP3-208ENST00000444533 ERCC6LQ2NKX8 1250 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 MROH9Q5TGP6 573 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 TMEM164Q5U3C3 297 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 ANKS6Q68DC2 871 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 EMBQ6PCB8 327 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 FAM92BQ6ZTR7 304 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 FRA10AC1Q70Z53 315 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 RAB11FIP2Q7L804 512 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 PIWIL4Q7Z3Z4 852 aaKnown RBP13.68□□□□□ -0.22
SSBP3-208ENST00000444533 FBXO39Q8N4B4 442 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 OR9A1PQ8NGU1 263 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 SLC44A1Q8WWI5 657 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 ASB11Q8WXH4 323 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 TSNARE1Q96NA8 513 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 PAFAH2Q99487 392 aa13.68□□□□□ -0.22
SSBP3-208ENST00000444533 OLFM1Q99784 485 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms