RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MSLNQ13421 630 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-208ENST00000443046 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 DEFB110Q30KQ9 67 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 TLDC1Q6P9B6 456 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 GDF7Q7Z4P5 450 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 ZNF655Q8N720 491 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-208ENST00000443046 MAK16Q9BXY0 300 aaKnown RBP13.87□□□□□ -0.19
HMGN1-208ENST00000443046 ASB8Q9H765 288 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 ICKQ9UPZ9 632 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 HS3ST3B1Q9Y662 390 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 ARL5AQ9Y689 179 aa13.87□□□□□ -0.19
HMGN1-208ENST00000443046 PCDH17O14917 1159 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 ALOX12BO75342 701 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 JRKO75564 520 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 H2AFZP0C0S5 128 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 TPBGLP0DKB5 382 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 ATP1B2P14415 290 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-208ENST00000443046 PDHA2P29803 388 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 TYRO3Q06418 890 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 RPA4Q13156 261 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 MPP3Q13368 585 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 TESK1Q15569 626 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 TAF1AQ15573 450 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-208ENST00000443046 TAZQ16635 292 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 KIRREL2Q6UWL6 708 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 UNC5AQ6ZN44 842 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 H2AFVQ71UI9 128 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 TRIM73Q86UV7 250 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 NXPE1Q8N323 547 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 BCORP1Q8N888 145 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 OR4K2Q8NGD2 314 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-208ENST00000443046 FKBP10Q96AY3 582 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 SPSB2Q99619 263 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 PACSIN1Q9BY11 444 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 LHPPQ9H008 270 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 SLC26A1Q9H2B4 701 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 DEF6Q9H4E7 631 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 WDR54Q9H977 334 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 ENAMQ9NRM1 1142 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 OLAHQ9NV23 265 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 SPHK1Q9NYA1 384 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 SAE1Q9UBE0 346 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-208ENST00000443046 FKBPLQ9UIM3 349 aa13.86□□□□□ -0.19
HMGN1-208ENST00000443046 MAP1AP78559 2803 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 IGLV3-16A0A075B6K0 115 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 IFRD1O00458 451 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 ALBP02768 609 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 RALBP11234 206 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 DYNLT1P63172 113 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 ZBED6P86452 979 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 Q0VFX4 171 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 PRKG2Q13237 762 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 SLC5A12Q1EHB4 618 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 ZNF630Q2M218 657 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 LRRC38Q5VT99 294 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 FAM180AQ6UWF9 173 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 BNC2Q6ZN30 1099 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 BZW1Q7L1Q6 419 aaKnown RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 OVCH1Q7RTY7 1134 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 IPMKQ8NFU5 416 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 HEXDCQ8WVB3 486 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 TFB1MQ8WVM0 346 aaKnown RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 TFGQ92734 400 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-208ENST00000443046 ULK4Q96C45 1275 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 DCUN1D1Q96GG9 259 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 CNDP1Q96KN2 507 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 TAAR6Q96RI8 345 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 LMF1Q96S06 567 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 VAT1Q99536 393 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 C19orf43Q9BQ61 176 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 GORASP1Q9BQQ3 440 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 TRIM8Q9BZR9 551 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 EPS8L2Q9H6S3 715 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 TXLNGQ9NUQ3 528 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 CAPN11Q9UMQ6 739 aa13.85□□□□□ -0.19
HMGN1-208ENST00000443046 A0A0J9YY10 115 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 C5orf60A6NFR6 353 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 C2orf81A6NN90 581 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 AGTP01019 485 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 CHRM5P08912 532 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-208ENST00000443046 PECAM1P16284 738 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-208ENST00000443046 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-208ENST00000443046 TMPRSS15P98073 1019 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 MFAP5Q13361 173 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 MESDQ14696 234 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 NKG7Q16617 165 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 MFSD7Q6UXD7 560 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 ISLR2Q6UXK2 745 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 RANBP10Q6VN20 620 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 COX15Q7KZN9 410 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 PID1Q7Z2X4 250 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 PARP9Q8IXQ6 854 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 ZNF295-AS1Q8N0V1 137 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 CATSPER1Q8NEC5 780 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 RNF25Q96BH1 459 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-208ENST00000443046 COPS8Q99627 209 aa13.84□□□□□ -0.19
HMGN1-208ENST00000443046 NDC1Q9BTX1 674 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms