RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TRIM55Q9BYV6 548 aa8.54□□□□□ -1.04
USP6NL-203ENST00000443016 SIDT1Q9NXL6 827 aaKnown RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 TMEM184BQ9Y519 407 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 HEMK1Q9Y5R4 338 aaPredicted RBP8.54□□□□□ -1.04
USP6NL-203ENST00000443016 RP1L1Q8IWN7 2480 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ZNF891A8MT65 544 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 AGAP14A8MT82 685 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 AP3B1O00203 1094 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CLGNO14967 610 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 KIAA0754O94854 1291 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 APRTP07741 180 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CCNYL3P0C7X3 344 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SFTPCP11686 197 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 NELFEP18615 380 aaKnown RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ACRV1P26436 265 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 PRLHRP49683 370 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ITGA8P53708 1063 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ABHD18Q0P651 414 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CDH17Q12864 832 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 MSLNQ13421 630 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 TUBB3Q13509 450 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 TBR1Q16650 682 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SKIDA1Q1XH10 827 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CCDC38Q502W7 563 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 BORAQ6PGQ7 559 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 XKR5Q6UX68 686 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 PRICKLE2Q7Z3G6 844 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 PRUNE1Q86TP1 453 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 LILRA3Q8N6C8 439 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CLDN19Q8N6F1 224 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 STYXQ8WUJ0 223 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CDKN2AIPNLQ96HQ2 116 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SLC45A3Q96JT2 553 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 LINC00615Q96LM1 132 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 FMO2Q99518 471 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CCM2Q9BSQ5 444 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 RAB33BQ9H082 229 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 KIR3DX1Q9H7L2 352 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ETNK1Q9HBU6 452 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 NLE1Q9NVX2 485 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ZDHHC3Q9NYG2 299 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 HEBP2Q9Y5Z4 205 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 NBASA2RRP1 2371 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 IGHV5-51A0A0C4DH38 117 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 LOC101059948A0A1B0GTJ6 334 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 OR6C74A6NCV1 312 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 OR5K3A6NET4 321 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 NKX2-8O15522 239 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 NDUFS1P28331 727 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SERPINB3P29508 390 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ST13P50502 369 aaKnown RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 PLTPP55058 493 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 CACNG1Q06432 222 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 LINC00303Q3SY05 128 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 RNASEH2BQ5TBB1 312 aaKnown RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 C16orf46Q6P387 395 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 EXD3Q8N9H8 876 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 OR4E2Q8NGC2 313 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 OR52K1Q8NGK4 314 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 ZFPM2Q8WW38 1151 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 KLHL6Q8WZ60 621 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.53□□□□□ -1.048e-8■■■■■ 44.9
USP6NL-203ENST00000443016 CATSPER2Q96P56 530 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 FERD3LQ96RJ6 166 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 MAP3K3Q99759 626 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SLC12A9Q9BXP2 914 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 XAB2Q9HCS7 855 aaKnown RBP8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SOHLH2Q9NX45 425 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 SLC24A2Q9UI40 661 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 RARRES3Q9UL19 164 aa8.53□□□□□ -1.04
USP6NL-203ENST00000443016 C17orf113A0A1B0GUU1 675 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 TLCD2A6NGC4 264 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 H7C0S8 307 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SLC28A2O43868 658 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PRSS56P0CW18 603 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PLA2G2AP14555 144 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF28P17035 718 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 TCN2P20062 427 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 MAGEA6P43360 314 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 CCR10P46092 362 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 ARCN1P48444 511 aaKnown RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 ARL4CP56559 192 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 MC1RQ01726 317 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 ACY1Q03154 408 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 KCNJ11Q14654 390 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 KCNAB1Q14722 419 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 HIBCHQ6NVY1 386 aaPredicted RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 GALNT6Q8NCL4 622 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 LCN9Q8WX39 176 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 STARD8Q92502 1023 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 CPT1BQ92523 772 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 CD180Q99467 661 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 TTC1Q99614 292 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SMAD5Q99717 465 aaKnown RBP8.52□□□□□ -1.05
USP6NL-203ENST00000443016 PARD6BQ9BYG5 372 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SPRY4Q9C004 299 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SAP130Q9H0E3 1048 aa8.52□□□□□ -1.05
USP6NL-203ENST00000443016 SRMSQ9H3Y6 488 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms