RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 UBAP2LQ14157 1087 aaKnown RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 SSPNQ14714 243 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 PTPRCAPQ14761 206 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 KIR2DS3Q14952 304 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 MSS51Q4VC12 460 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 ZC3H12BQ5HYM0 836 aaKnown RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 YOD1Q5VVQ6 348 aaPredicted RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 DENND5AQ6IQ26 1287 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 SDCCAG8Q86SQ7 713 aaPredicted RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 LRRC6Q86X45 466 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 CCDC89Q8N998 374 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 LRRC57Q8N9N7 239 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 PPHLN1Q8NEY8 458 aaKnown RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 PROKR1Q8TCW9 393 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 ASZ1Q8WWH4 475 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 TM9SF4Q92544 642 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 ELMO1Q92556 727 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 NACC2Q96BF6 587 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 DNAJC1Q96KC8 554 aaKnown RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 RMDN2Q96LZ7 410 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 PANX3Q96QZ0 392 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 CARD6Q9BX69 1037 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 RAB11FIP5Q9BXF6 653 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 AP1M1Q9BXS5 423 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 OR52A5Q9H2C5 316 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 FAM96AQ9H5X1 160 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 TXLNGQ9NUQ3 528 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 ACTR10Q9NZ32 417 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 C5AR2Q9P296 337 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 FAM8A1Q9UBU6 413 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 NDOR1Q9UHB4 597 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 TLK1Q9UKI8 766 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 DRG1Q9Y295 367 aaKnown RBP7.54□□□□□ -1.2
CD44-211ENST00000442151 ZKSCAN5Q9Y2L8 839 aa7.54□□□□□ -1.2
CD44-211ENST00000442151 RCCD1A6NED2 376 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 MROH6A6NGR9 719 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 TMEM150CB9EJG8 249 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 ALPPP05187 535 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 ITGAXP20702 1163 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 F8A1P23610 371 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 NPY2RP49146 381 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 TTPAP49638 278 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 NFKB2Q00653 900 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 MSLNQ13421 630 aaPredicted RBP7.53□□□□□ -1.2
CD44-211ENST00000442151 SPARCL1Q14515 664 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 POU6F1Q14863 301 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 RPS6KA1Q15418 735 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 GPR19Q15760 415 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 SLC5A12Q1EHB4 618 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 PLEKHS1Q5SXH7 462 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 OR52E1Q8NGJ3 308 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 OR4L1Q8NH43 312 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 SLC35B2Q8TB61 432 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 HES6Q96HZ4 224 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 FOPNLQ96NB1 174 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 TRAPPC9Q96Q05 1148 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 PITPNM3Q9BZ71 974 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 SLC29A3Q9BZD2 475 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 TRIM4Q9C037 500 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 ING2Q9H160 280 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 C10orf88Q9H8K7 445 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 IRAK4Q9NWZ3 460 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 UTP6Q9NYH9 597 aaKnown RBP7.53□□□□□ -1.2
CD44-211ENST00000442151 PLCL2Q9UPR0 1127 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 TP53TG5Q9Y2B4 290 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 MRPS18BQ9Y676 258 aaKnown RBP7.53□□□□□ -1.2
CD44-211ENST00000442151 DUSP10Q9Y6W6 482 aa7.53□□□□□ -1.2
CD44-211ENST00000442151 A0A0J9YY10 115 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 CCDC78A2IDD5 438 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 TTLL8A6PVC2 850 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 ISM1B1AKI9 464 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 H3BMM5 538 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 SGTAO43765 313 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 SUN1O94901 812 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 METTL18O95568 372 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 TPH1P17752 444 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 CCL11P51671 97 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 DCDP81605 110 aaKnown RBP7.52□□□□□ -1.2
CD44-211ENST00000442151 CDK16Q00536 496 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 KCNAB1Q14722 419 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 DBN1Q16643 649 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 FAM214AQ32MH5 1076 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 TCTE1Q5JU00 501 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 IRAK1BP1Q5VVH5 260 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 SPESP1Q6UW49 350 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 UNC5DQ6UXZ4 953 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 RAD9BQ6WBX8 426 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 ZNF517Q6ZMY9 492 aaPredicted RBP7.52□□□□□ -1.2
CD44-211ENST00000442151 MPP5Q8N3R9 675 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 FAM26EQ8N5C1 309 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 OR5K2Q8NHB8 316 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 COG1Q8WTW3 980 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 TMEM121Q9BTD3 319 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 NDC1Q9BTX1 674 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 LACRTQ9GZZ8 138 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 EPN3Q9H201 632 aa7.52□□□□□ -1.2
CD44-211ENST00000442151 CHST8Q9H2A9 424 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms