RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LSM14AQ8ND56 463 aaKnown RBP22.92■■□□□ 1.26
VARS-217ENST00000440048 GSDMBQ8TAX9 411 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 SNRNP27Q8WVK2 155 aaKnown RBP22.92■■□□□ 1.26
VARS-217ENST00000440048 FAM136AQ96C01 138 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 SNF8Q96H20 258 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 ELMO2Q96JJ3 720 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 PWWP2AQ96N64 755 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 TRIM31Q9BZY9 425 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 FBXO6Q9NRD1 293 aaPredicted RBP22.92■■□□□ 1.26
VARS-217ENST00000440048 C1GALT1Q9NS00 363 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 ACTR10Q9NZ32 417 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 PLAGL1Q9UM63 463 aa22.92■■□□□ 1.26
VARS-217ENST00000440048 TMEM184BQ9Y519 407 aaPredicted RBP22.92■■□□□ 1.26
VARS-217ENST00000440048 EIF4E1BA6NMX2 242 aaKnown RBP22.91■■□□□ 1.26
VARS-217ENST00000440048 C2orf74A8MZ97 194 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 SMAPO00193 183 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 SEC31AO94979 1220 aaKnown RBP22.91■■□□□ 1.26
VARS-217ENST00000440048 FGF5P12034 268 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 CHRM3P20309 590 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 SLC1A2P43004 574 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 HSP90AA5PQ58FG0 334 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 UNC5DQ6UXZ4 953 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 TIPARPQ7Z3E1 657 aaKnown RBP22.91■■□□□ 1.26
VARS-217ENST00000440048 IGDCC3Q8IVU1 814 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 LMNTD2Q8IXW0 634 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 CACNA2D3Q8IZS8 1091 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 SPATA4Q8NEY3 305 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 CALML6Q8TD86 181 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 RNF31Q96EP0 1072 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 NAT9Q9BTE0 207 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 GALPQ9UBC7 116 aa22.91■■□□□ 1.26
VARS-217ENST00000440048 SNRNP200O75643 2136 aaKnown RBP22.9■■□□□ 1.26
VARS-217ENST00000440048 ATMQ13315 3056 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 SLC9B1P1A6NJY1 282 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 EFCAB8A8MWE9 144 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 TK2O00142 265 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 KDM1AO60341 852 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 TTC4O95801 387 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 DLGAP3O95886 979 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 RPN2P04844 631 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 ZNF28P17035 718 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 MRPS25P82663 173 aaKnown RBP22.9■■□□□ 1.26
VARS-217ENST00000440048 ACY1Q03154 408 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 TUBB3Q13509 450 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 CYB5D1Q6P9G0 228 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 KCNMB4Q86W47 210 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 PPP1R3BQ86XI6 285 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 RASGRP3Q8IV61 690 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 DCUN1D3Q8IWE4 304 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 NLGN4XQ8N0W4 816 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 PDIK1LQ8N165 341 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 IL22RA1Q8N6P7 574 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 NLGN4YQ8NFZ3 816 aaPredicted RBP22.9■■□□□ 1.26
VARS-217ENST00000440048 PITPNM3Q9BZ71 974 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 ULBP3Q9BZM4 244 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 PDE7BQ9NP56 450 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 LATS2Q9NRM7 1088 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 IARS2Q9NSE4 1012 aaKnown RBP22.9■■□□□ 1.26
VARS-217ENST00000440048 SOHLH2Q9NX45 425 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 OR6C2Q9NZP2 312 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 FBXO5Q9UKT4 447 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 BTRCQ9Y297 605 aa22.9■■□□□ 1.26
VARS-217ENST00000440048 PIPSLA2A3N6 862 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 TP73O15350 636 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 SPAG6O75602 509 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 CHRM5P08912 532 aaPredicted RBP22.89■■□□□ 1.25
VARS-217ENST00000440048 SPTBP11277 2137 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 WT1P19544 449 aaPredicted RBP22.89■■□□□ 1.25
VARS-217ENST00000440048 RPL21P46778 160 aaKnown RBP22.89■■□□□ 1.25
VARS-217ENST00000440048 MPP1Q00013 466 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 C2orf54Q08AI8 447 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 GBX1Q14549 363 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 KYNUQ16719 465 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.89■■□□□ 1.25
VARS-217ENST00000440048 SPANXN3Q5MJ09 141 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 HP1BP3Q5SSJ5 553 aaPredicted RBP22.89■■□□□ 1.25
VARS-217ENST00000440048 ZNF549Q6P9A3 640 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 SKA2Q8WVK7 121 aaPredicted RBP22.89■■□□□ 1.25
VARS-217ENST00000440048 FAM167BQ9BTA0 163 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 TWSG1Q9GZX9 223 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 FGF21Q9NSA1 209 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 SPHK1Q9NYA1 384 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 RARRES3Q9UL19 164 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 SNX24Q9Y343 169 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 NFS1Q9Y697 457 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 BAHCC1Q9P281 2608 aa22.89■■□□□ 1.25
VARS-217ENST00000440048 E5RI56 91 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 ERVK-10P10266 1014 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 ST6GAL1P15907 406 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 MAP4P27816 1152 aaKnown RBP22.88■■□□□ 1.25
VARS-217ENST00000440048 PKLRP30613 574 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 ELK3P41970 407 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 GRB7Q14451 532 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 HIF1AQ16665 826 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 TMTC4Q5T4D3 741 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 SPESP1Q6UW49 350 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 ZBTB2Q8N680 514 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 TRAPPC9Q96Q05 1148 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 OR2A14Q96R47 310 aa22.88■■□□□ 1.25
VARS-217ENST00000440048 MENTQ9BUN1 341 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms