RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 VPS9D1Q9Y2B5 631 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 ITPR1Q14643 2758 aa23.29■■□□□ 1.32
CPNE1-217ENST00000439669 PIPSLA2A3N6 862 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 SPAG6O75602 509 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 LONRF1Q17RB8 773 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 TAF1BQ53T94 588 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-217ENST00000439669 UNC5DQ6UXZ4 953 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 CENPUQ71F23 418 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 DCUN1D3Q8IWE4 304 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 ESX1Q8N693 406 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 FAM136AQ96C01 138 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 TRIM51Q9BSJ1 452 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 GPN2Q9H9Y4 310 aaPredicted RBP23.28■■□□□ 1.32
CPNE1-217ENST00000439669 INTS10Q9NVR2 710 aaKnown RBP23.28■■□□□ 1.32
CPNE1-217ENST00000439669 BTRCQ9Y297 605 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 CACNA1GO43497 2377 aa23.28■■□□□ 1.32
CPNE1-217ENST00000439669 EIF4E1BA6NMX2 242 aaKnown RBP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 MAP3K7O43318 606 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 TIAF1O95411 115 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 F7P08709 466 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 CHRM5P08912 532 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 ST6GAL1P15907 406 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 PGAM1P18669 254 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 CHRM3P20309 590 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 TUBB4BP68371 445 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 DHX9Q08211 1270 aaKnown RBP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 TUBB2AQ13885 445 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 MAP7Q14244 749 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 GPR19Q15760 415 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 PLEKHS1Q5SXH7 462 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 C6orf15Q6UXA7 325 aaPredicted RBP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 DENND6AQ8IWF6 608 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 UNC5BQ8IZJ1 945 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 GALNT6Q8NCL4 622 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 CALML6Q8TD86 181 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 TUBB2BQ9BVA1 445 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 KLHL25Q9H0H3 589 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 OR6C2Q9NZP2 312 aa23.27■■□□□ 1.32
CPNE1-217ENST00000439669 TSR3Q9UJK0 312 aaKnown RBP23.27■■□□□ 1.32
CPNE1-217ENST00000439669 LOC101059948A0A1B0GTJ6 334 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 E5RI56 91 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 ERVH48-1M5A8F1 160 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 ATXN7O15265 892 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-217ENST00000439669 TTI1O43156 1089 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 BANF1O75531 89 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 TPBGLP0DKB5 382 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 PKMP14618 531 aaKnown RBP23.26■■□□□ 1.31
CPNE1-217ENST00000439669 PVRP15151 417 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 ADARP55265 1226 aaKnown RBP23.26■■□□□ 1.31
CPNE1-217ENST00000439669 ABHD18Q0P651 414 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 CTBP1Q13363 440 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 BBS9Q3SYG4 887 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 ZNF789Q5FWF6 425 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 SPESP1Q6UW49 350 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 TRIM73Q86UV7 250 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 BPHLQ86WA6 291 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-217ENST00000439669 PITPNM3Q9BZ71 974 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 CCDC68Q9H2F9 335 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 FANCEQ9HB96 536 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 FBXO6Q9NRD1 293 aaPredicted RBP23.26■■□□□ 1.31
CPNE1-217ENST00000439669 KCND1Q9NSA2 647 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 CIDEBQ9UHD4 219 aa23.26■■□□□ 1.31
CPNE1-217ENST00000439669 S1PR4O95977 384 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 UGT2B7P16662 529 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 IVDP26440 423 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 PKLRP30613 574 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 CASQ1P31415 396 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 SLC1A2P43004 574 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 MORF4L2Q15014 288 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 PWWP2BQ6NUJ5 590 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 TTC23LQ6PF05 361 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 FOPNLQ96NB1 174 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 KRT12Q99456 494 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 FAM167BQ9BTA0 163 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 TRIM31Q9BZY9 425 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 SPHK1Q9NYA1 384 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 RUVBL2Q9Y230 463 aaKnown RBP23.25■■□□□ 1.31
CPNE1-217ENST00000439669 FAM169AQ9Y6X4 670 aa23.25■■□□□ 1.31
CPNE1-217ENST00000439669 ISM1B1AKI9 464 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 STAT5AP42229 794 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 BDKRB1P46663 353 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 RAB28P51157 221 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 CRYMQ14894 314 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 KYNUQ16719 465 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 MSS51Q4VC12 460 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 HSP90AA5PQ58FG0 334 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 CNSTQ6PJW8 725 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 KCNMB4Q86W47 210 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 TMEM126BQ8IUX1 230 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 LMNTD2Q8IXW0 634 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 ZBTB2Q8N680 514 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 ZNF501Q96CX3 271 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-217ENST00000439669 IL17FQ96PD4 163 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 FCRL4Q96PJ5 515 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 TRAPPC9Q96Q05 1148 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 OR2A14Q96R47 310 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 EBNA1BP2Q99848 306 aaKnown RBP23.24■■□□□ 1.31
CPNE1-217ENST00000439669 EFHD1Q9BUP0 239 aa23.24■■□□□ 1.31
CPNE1-217ENST00000439669 SLC39A10Q9ULF5 831 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms