RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 GOLGA6L9A6NEM1 432 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 CYP1A2P05177 515 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 UMODP07911 640 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 MMP11P24347 488 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 CSNK1G2P78368 415 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 KIF5AQ12840 1032 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 TMEM115Q12893 351 aaPredicted RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 XRCC4Q13426 336 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 TUSC1Q2TAM9 212 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 FAAH2Q6GMR7 532 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 MEX3BQ6ZN04 569 aaKnown RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 TAOK1Q7L7X3 1001 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 VASH1Q7L8A9 365 aaPredicted RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 BEND7Q8N7W2 519 aaPredicted RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 LPCAT1Q8NF37 534 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 BRSK1Q8TDC3 778 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 ADAMTS18Q8TE60 1221 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 PPM1MQ96MI6 270 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 TTC25Q96NG3 672 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 TSGA10Q9BZW7 698 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 ZFYVE1Q9HBF4 777 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 SEMA3GQ9NS98 782 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 IMP3Q9NV31 184 aaKnown RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 TAS2R14Q9NYV8 317 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 PCSK1NQ9UHG2 260 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 AMACRQ9UHK6 382 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 SH3BGRL2Q9UJC5 107 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 FBXL4Q9UKA2 621 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 POMT2Q9UKY4 750 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 PSMD13Q9UNM6 376 aa10.77□□□□□ -0.69
CSTF3-203ENST00000438862 MAP1AP78559 2803 aaPredicted RBP10.77□□□□□ -0.69
CSTF3-203ENST00000438862 DYTNA2CJ06 578 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 H3BRJ5 948 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 MTX2O75431 263 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 RNF8O76064 485 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 POLR2CP19387 275 aaPredicted RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 PRDX3P30048 256 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 DNAJA1P31689 397 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 SERPINB6P35237 376 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 ARG2P78540 354 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 OGDHQ02218 1023 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 GALNT3Q14435 633 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 IHHQ14623 411 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 IFI16Q16666 785 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 LONRF1Q17RB8 773 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 NKAIN1Q4KMZ8 207 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 ALS2CLQ60I27 953 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 LINC00696Q6ZRV3 163 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 CCDC116Q8IYX3 515 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 RNF10Q8N5U6 811 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 ARMC2Q8NEN0 867 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 SPATA3Q8NHX4 192 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 N4BP2L2Q92802 583 aaPredicted RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 EID2BQ96D98 161 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 THOC3Q96J01 351 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 VPS35Q96QK1 796 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 PEBP4Q96S96 227 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 NDC1Q9BTX1 674 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 ADGRE3Q9BY15 652 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 KIR3DX1Q9H7L2 352 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 TNFRSF10DQ9UBN6 386 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 REXO2Q9Y3B8 237 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 COLEC10Q9Y6Z7 277 aa10.76□□□□□ -0.69
CSTF3-203ENST00000438862 PRRC2AP48634 2157 aaKnown RBP10.76□□□□□ -0.69
CSTF3-203ENST00000438862 ACANP16112 2415 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 GSAPA4D1B5 854 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 TMCO5BA8MYB1 307 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 SLC19A2O60779 497 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 CNOT3O75175 753 aaKnown RBP10.75□□□□□ -0.69
CSTF3-203ENST00000438862 PMPCBO75439 489 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 POP7O75817 140 aaKnown RBP10.75□□□□□ -0.69
CSTF3-203ENST00000438862 OR2B3O76000 313 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 KLHL18O94889 574 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 ST6GAL1P15907 406 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 HLA-DPA1P20036 260 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 AMPD1P23109 780 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 PSMA2P25787 234 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 NDUFS1P28331 727 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 ARL4AP40617 200 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 IST1P53990 364 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 DSC2Q02487 901 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 MAMLD1Q13495 774 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 CDSNQ15517 529 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 KHDC1Q4VXA5 237 aaKnown RBP10.75□□□□□ -0.69
CSTF3-203ENST00000438862 C1orf189Q5VU69 101 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 METRNLQ641Q3 311 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 KIAA1328Q86T90 577 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 OR4E2Q8NGC2 313 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 HAS2Q92819 552 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 ZNF653Q96CK0 615 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 ZNF830Q96NB3 372 aaPredicted RBP10.75□□□□□ -0.69
CSTF3-203ENST00000438862 INSM2Q96T92 566 aaPredicted RBP10.75□□□□□ -0.69
CSTF3-203ENST00000438862 PITPNM3Q9BZ71 974 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 THAP2Q9H0W7 228 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 TXLNGQ9NUQ3 528 aa10.75□□□□□ -0.69
CSTF3-203ENST00000438862 CDC23Q9UJX2 597 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms